Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07659 ATGATGGCTGAGGATTGGGATCTCTTTGCCATCGTGCGAAGCTGTCAATCAGCCACCAATACTGCCACAACAAAAAACCCACCAAATAACACCACCAATACTACACCTCCTTCCTTGGCCAATTCTACTGTTAAGGAGGAAGAAGAAGAATATGAGGCATTTTCTTTTCCCAATATAGTGCAACCCATGACCAATGAGTTTCAAGAGCTAAACCAATTGTTCACATCCTTTAACCCCACCACCAACACCACTACCACTAGTGGTTGTGGTATCAATCCCAATTCCCCTGATTTTGCAGGACAACAGCAAAGCCACCATCTTCCTGTGCTTGCCCCCCTTACTACTCACACCTCCATTTGGCCCCATTTTGTGCCAGAAGCATCCACTTCTTCTAGTTTCAATAGATTCCATGACCAACAACAACAACAGCAACCGCAATCACAACATGTACAGAAACAACAGAATCAACTACAACTAATTCAGAAACAAGAGTTTCAAGCACCCCAGAGCAATTCTCCTTTAGTTTTACCAAACCCACAACCCCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCATGTAACCGCAGATAACGTCTCAGCAGATTTATGGGCATGGCGTAAATATGGACAAAAACCCATTAAAGGTTCACCATATCCAAGGAACTATTATAGGTGTAGCAGCTCAAAAGGTTGTGCAGCACGAAAGCAAGTTGAACGGAGCAACACTGAAGCTGGCATGTTCATCGTCACGTACACCGGAGACCACACCCATCCCAGGCCCACCCACCGGAACTCACTCGCCGGAAGTACGAGAACCAAGCAACATCAACCCTCTTCACAAGTCAACACTTTACCTTCATCCTCTTCCTCTCCTGTAACACACTCTCCGGTTTCAACGTCCGCAGACCCACCGGAAAACGAGGAAGGAGATCCGGATCCAGACCCGGACCCGGAAATTGAATCCGAGGATGAAGGAGAAGATGAAGCAGACATTCTGCTACCCAACCCGGTTGCCATGGCAACGAATGTCTTGCTGGATTTGGATCACTTTGACGGTGGTTGTTCAACCGGTGGATCCTTGCCCAACACGAACCCGGTTTGA 1122 0.4697 MMAEDWDLFAIVRSCQSATNTATTKNPPNNTTNTTPPSLANSTVKEEEEEYEAFSFPNIVQPMTNEFQELNQLFTSFNPTTNTTTTSGCGINPNSPDFAGQQQSHHLPVLAPLTTHTSIWPHFVPEASTSSSFNRFHDQQQQQQPQSQHVQKQQNQLQLIQKQEFQAPQSNSPLVLPNPQPQTPRSRKRKSQQKKMVCHVTADNVSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCAARKQVERSNTEAGMFIVTYTGDHTHPRPTHRNSLAGSTRTKQHQPSSQVNTLPSSSSSPVTHSPVSTSADPPENEEGDPDPDPDPEIESEDEGEDEADILLPNPVAMATNVLLDLDHFDGGCSTGGSLPNTNPV. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07659 373 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 328 IPR044810 GO:0003700
Seca7g07659 373 MobiDBLite consensus disorder prediction 269 309 - -
Seca7g07659 373 Gene3D WRKY domain 189 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g07659 373 ProSiteProfiles WRKY domain profile. 201 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g07659 373 MobiDBLite consensus disorder prediction 128 173 - -
Seca7g07659 373 FunFam WRKY transcription factor 22 189 260 - -
Seca7g07659 373 SUPERFAMILY WRKY DNA-binding domain 201 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g07659 373 Pfam WRKY DNA -binding domain 208 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g07659 373 MobiDBLite consensus disorder prediction 128 196 - -
Seca7g07659 373 MobiDBLite consensus disorder prediction 258 342 - -
Seca7g07659 373 MobiDBLite consensus disorder prediction 19 40 - -
Seca7g07659 373 SMART WRKY_cls 206 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g07659 373 MobiDBLite consensus disorder prediction 312 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07659 Seca-Chr7 180651277 180653109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07659 183 365 WRKY Transcription Factor Family AT4G01250 50.000 9.24e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g07659 WRKY 3.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07659 - - aprc:113871802 356.681