Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07656 ATGGCAGACCAGTCACCACAATTGTCTCCAAAAACTTACAAACTAACAGCTACTTCAATCTCCTACACCAAATCAACATCCACCAACAGCACCTTTGCATTTGCACCATTCTTCCTCTTCAAACATTGTACTTCAACCCCACCAACTTACATCCTCAAAGATGTCTCCCTCACAGCTTATCCCTCTGAGATCCTAGCCATTGTAGGTCCAAGTGGTGCTGGAAAATCCACTCTTTTAGACATTCTTTCTGCTCGAACATTACCCTCCAATGGTTCTCTTTCCCTTAACTCTTCCCCTCTCAACCCTTCCTCCTACCGCAAACTCTCTGCCTATGTCCCTCAACATGATGCATGTCTCCCTCTGCTTACTGTTTCTGAAACTTTTGCTTTCTCTGCTCGCCTTCTCAAGCCTAAGACTTGTGACATTGTTGCCATTGTTTCCTCTCTTCTCACTGAACTGAGGCTGACCCATTTGGCTAACACAAGGCTTGCTCATGGGCTATCTGGTGGAGAACATAGAAGGGTCTCCATTGGTTTGAGTCTCCTTCATGATCCTGCTGTTTTGCTCCTTGATGAACCCACTTCTGGTCTTGACAGTACCTCTGCTTTCAAAGTCATGCAAATTCTCAAATCAACTTGTGTTTCTAGAAACAGGACAATTATCCTCTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGTATTGATAGAATTTTACTTCTATCAAAAGGGACCGTGGTTCATCAAGGAAGCATTGCTTCACTCCAAGCATTCTTGCACTCAAAAGGGTTCACTGTCCCTCATCAGCTCAATGCTTTGGAATATGCAATGGAAATACTAAACCAATTGAATGAGGTTAAACCCATCACTCTCCCAAGTCTCCCTGAATCACCAGAAAGTTCTACAAGTTCTCTAATGTCTGACAATGAAACTACAACAACCAAAGAGATCAGGTACAAGAGTTCTAGGATTCATGAAATTTGTACTCTTTATAACAGGTTTTGGAAGATCATTTACAGAACAAGGCAGCTTCTTTTGACAAACACAGCAGAAGCACTTATTGTGGGTCTTGTTTTAGGAACAATTTATATCAATATTGGGTTTGATAAGGAAGGTATTGAGAAAAGGTTTGGTCTTTTTGCCTTCACTCTCACATTCCTCTTATCCTCCACAACTGAGACACTTCCCATCTTTATCAATGAGAGGCCAATCTTGCTAAGAGAAACTTCAAGTGGGGTTTATAGGCTATCATCTTATCTAATTGCAAACACACTTGTTTTCTTGCCATACTTGTTGGTGGTTGCTATCATATACTCCATCCCAGTCTACTTCCTAGTGGGTCTTTGTGCTTCTTGGCTATCTTTTGCTTATTTTGTTTTGGTGATATGGGTCATAGTTCTAATGGCAAACTCATTTGTGCTCTTTTTGAGCTCTCTTGCTCCAAACTACATTGCTGGGACTTCACTCTTGACAGTACTTCTTGCAGCATTTTTTCTATTCTCTGGCTACTTTATCTCAAAGGATAGCTTACCAAAATACTGGCTCTTCATGTACTTCTTCTCTATGTACAAATACGCTCTTGATGCACTTCTAATCAATGAGTACTCTTGCTTAGCTACAAGGTGTTTTATATGGTACCAAGAGAATCAAGAGTGCATGGTCACTGGAGGTGACGTGCTACAGAAGAGAGGGCTCCACGAGAGTGAAAGATGGACCAACGTGTACTTCTTGATTGGGTTCTTTGTGTTTTATCGTGTGCTCTGCTTCTTGGTTTTAATTAGAAGAGTTTCAAGATCCAAAACTTGA 1806 0.4131 MADQSPQLSPKTYKLTATSISYTKSTSTNSTFAFAPFFLFKHCTSTPPTYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSNGSLSLNSSPLNPSSYRKLSAYVPQHDACLPLLTVSETFAFSARLLKPKTCDIVAIVSSLLTELRLTHLANTRLAHGLSGGEHRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRNRTIILSIHQPSFKILSCIDRILLLSKGTVVHQGSIASLQAFLHSKGFTVPHQLNALEYAMEILNQLNEVKPITLPSLPESPESSTSSLMSDNETTTTKEIRYKSSRIHEICTLYNRFWKIIYRTRQLLLTNTAEALIVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAIIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMYFFSMYKYALDALLINEYSCLATRCFIWYQENQECMVTGGDVLQKRGLHESERWTNVYFLIGFFVFYRVLCFLVLIRRVSRSKT. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07656 601 FunFam ATP-binding cassette transporter 41 261 - -
Seca7g07656 601 Gene3D - 39 287 IPR027417 -
Seca7g07656 601 Pfam ABC-2 type transporter 326 535 IPR013525 GO:0016020|GO:0140359
Seca7g07656 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 259 IPR027417 -
Seca7g07656 601 Pfam ABC transporter 52 195 IPR003439 GO:0005524
Seca7g07656 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 268 IPR003439 GO:0005524
Seca7g07656 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 586 - -
Seca7g07656 601 SMART AAA_5 61 245 IPR003593 GO:0016887
Seca7g07656 601 Pfam ABC-2 type transporter 225 285 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07656 Seca-Chr7 180618320 180620125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07656 45 263 Calmodulin-binding Proteins AT2G36910 28.879 1.02e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07656 K05681 - gmx:100790712 930.243