Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07651 ATGGAACAGAAGCACGTCCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTAGGTGTGGGACTGGGGTTAAGCACAGGACAGGTTGTGCAAAAATGGGTTGGAGGAGATACTAAGTCTAATGAGATTTCTGGGGAGCAGATTGTGCTGGAGCTCAAGAACATAGTGGTTGATGGGAAGAACAGCACAGTCACATTTGATGACTTTCCTTATTACTTAAGTGAAAGAGTCCGGGTTTTGTTGACAAGTGCTGGATATGTTCATTTAAAACAACAACACTTTTCCAAGCACATGAGGAACCTTTTACCAGCAAGCAAAGCTATTTTGCTTTATGGACCTGCAGAACCTTATCACCAAAAGCTTGCCCAAGCTTTAGCACATTGCTTTGAATCGAAGTTACTGTTGCTAGATGTTACTGACTTCTCTTTGAAGATGCAGAGGAAATATGGATGTTCTAAAAAAGAACCATATTTTAAAAGGTCCATATCTGAGGTGACTTTGGAGCGCATATCTGATTTGTTTGGTTCCTTGTCGATCCTCCCTTCAACAGGTGAAACAAGAGGTACACTAAGTCGACAAAATAGTGGAATTGAAAATTCCAGCAATTCTCCAAAACTTCGTAGGAACGCCTCTAATGCATCTGAATCCAGTAGCAGTTCCGAAAATGGTCCATTGGATCCAGCTTCTTTTAAGTGTGCAAGCCGCTTCTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTATATGAGGTCTTGGTATCTATGTCAGAAACTGGATCCATTATTTTATACATCAAGGATGTTGAGAAGCTCTTTCTTCGATCACCAAGGATATTCAATTTGTTCCAAAAGCTGCTAAAGAAACTTTCAGGGTCAGTATTAATACTCGGTTCCCGGATTTACAGTTCAGAAGATGATTGTACAGAAGTTGGTGAAAAGCTCACTGTGTTATTCCCTTACAACATTGAGATCGAACCACCTCAAGATGAGACTCGTCTTGGGAAGTGGAAAACCCAGCTAGCAGTGGCCATGAAATTAATTCAGTTTGAAGATAACAGAAACCACATTGCTGAAGTACTTGCAGAAAATGACATTGATTGTAATGACTTGGATTCAATCTGCCACGATGACACTGACCTACTCAGTGATTATATTGAAGAGATTGTGGTATCTGCAATTTCTCACCACTTGATGGATACCAAACATCCAGAATACCGAAATGGAAAGCTAATTATATCAGCCAAGAGTTTGTCCCATGTATTGAAGCTGTTCCGGGAAGGTGGAAGTTGTGGAAAAGATAATACCAAGACTAAAGAATCAAGCAAGGAAGTTCCTTCTGACAATGAGTATGAGAAGCGTATAAGAGCAGAGGTTATCCCAGCAAAAGAGTTAGGGGTTACATTTGCAGATATTGGTGCATTGGATGATATTAAGGAATCACTTCAGGAATTGGTCATACTTCCCCTTAGAAGACCAGACCTATTCAAAGGAGATGGACTCCTGAAACCTTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAAGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATATCCACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCAAAGGTTGCCCCAACTATTATCTTCATTGATGAGGTTGATAGCATGCTTGGACAGCGGTCCAGATATTGTGAGCACGAGGCAATGAGAAAGATAAAAAATGAATTTATGACTCACTGGGATGGGCTATTATCAAAAGCTCATGAGCAAGTTCTGGTTCTTGCTGCCACTAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAGCGCAGGATCATGGTTGGTCTTCCATCTGCTGAGACAAGGGAAGTGATCTTGAAAACTCTACTAGCTAAGGAAAAATATGAAAATATAGACTTCAAAGAACTTTCAACTATGACAGAAGGATATACTGCAAGCGATCTTAAGAATTTGTGCATGACGGCAGCTTATCAACCTCTTAGGGAGCTAATGCGGAAAGAGAGGGCGAAAGAAATGGTAGATAAAGAAGACCAAGTTCAAAGCTCACAAGATGCTTCCAATGCTACAGAAGATAAAGAAGACCAAGTTCAAAGCTCACAAGACAATCCCAGTGCTACAGAAGATAAAGAAGACCAAGTGATTACCTTGAGGCCTTTAAACATGGAAGACATGAGACAAGCAAAGAATAAGGTGGCTGCGAGTTTTGCTGCAGAAGGATCAATAATGGAAGAGCTGAAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAAAGCAGCTCACTTATTTCCTTTAG 2385 0.4084 MEQKHVLLSALSVGVGLGVGLGLSTGQVVQKWVGGDTKSNEISGEQIVLELKNIVVDGKNSTVTFDDFPYYLSERVRVLLTSAGYVHLKQQHFSKHMRNLLPASKAILLYGPAEPYHQKLAQALAHCFESKLLLLDVTDFSLKMQRKYGCSKKEPYFKRSISEVTLERISDLFGSLSILPSTGETRGTLSRQNSGIENSSNSPKLRRNASNASESSSSSENGPLDPASFKCASRFCFDEKLFVQSLYEVLVSMSETGSIILYIKDVEKLFLRSPRIFNLFQKLLKKLSGSVLILGSRIYSSEDDCTEVGEKLTVLFPYNIEIEPPQDETRLGKWKTQLAVAMKLIQFEDNRNHIAEVLAENDIDCNDLDSICHDDTDLLSDYIEEIVVSAISHHLMDTKHPEYRNGKLIISAKSLSHVLKLFREGGSCGKDNTKTKESSKEVPSDNEYEKRIRAEVIPAKELGVTFADIGALDDIKESLQELVILPLRRPDLFKGDGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSISTITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRSRYCEHEAMRKIKNEFMTHWDGLLSKAHEQVLVLAATNRPFDLDEAIIRRFQRRIMVGLPSAETREVILKTLLAKEKYENIDFKELSTMTEGYTASDLKNLCMTAAYQPLRELMRKERAKEMVDKEDQVQSSQDASNATEDKEDQVQSSQDNPSATEDKEDQVITLRPLNMEDMRQAKNKVAASFAAEGSIMEELKQWNDLYGEGGSRKKKQLTYFL. 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07651 794 Gene3D - 463 725 IPR027417 -
Seca7g07651 794 Gene3D - 637 717 - -
Seca7g07651 794 MobiDBLite consensus disorder prediction 696 740 - -
Seca7g07651 794 SMART AAA_5 501 638 IPR003593 GO:0016887
Seca7g07651 794 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 793 - -
Seca7g07651 794 Pfam ATPase family associated with various cellular activities (AAA) 505 635 IPR003959 GO:0005524|GO:0016887
Seca7g07651 794 ProSitePatterns AAA-protein family signature. 608 627 IPR003960 GO:0005524|GO:0016887
Seca7g07651 794 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 463 639 - -
Seca7g07651 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 463 684 IPR027417 -
Seca7g07651 794 MobiDBLite consensus disorder prediction 184 224 - -
Seca7g07651 794 Pfam AAA+ lid domain 657 697 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07651 Seca-Chr7 180551341 180559666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07651 464 694 Calmodulin-binding Proteins AT3G56690 40.000 2.32e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07651 - - gmx:100793760 1127.85