Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07648 ATGGCAAGTGCTACTTCTTCCTTTCCTTGTTATTGGATCGTTCTCACTCTAGTCCTAGGCTGTTTTAGTAGCTGCATTTCGAGCCAGATTAGTTTGGGCTCGAGATTATTGGCTAGCAAGGACCAAACTTGGGTTTCTGATAATGGCACATTTGCTATGGGCTTCACTCCATCAGACACTGATAATCGATTATTTGTGTTGGGTATTTGGTTTGCAGAGCTTCCAGGAGATCGAACTATAGTTTGGTCACCCCATAGAGACTCTCCTGTTTCTCAAGATGCAATCTTGGAGCTTGACACCACTGGCAACCTTGTTCTCATGGATAGAGACATCACCACATGGGCCTCAAACACCTCAGGTGCTGGTGTAGTAGCTGCAGTTATGGCTGAATCTGGCAACTTCATCCTTCATAACACCAACAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCTGATACACTCCTCCCCAACCAGCCTCTAACAGTTTCTTCAGAATTAACATCATCAAAGTCTTCCTCTCATGGTGGCTACTATGCTCTCAAAATGCTTCAACAGCCCACTTCCTTAAGCCTTGCATTGACTTACAACCTGCTAGAAACTTACCAGGATTTGGATGAATCATACACCAACTATTCCTATTGGAAAGGCCCTGATATCTCCAATGTCACAGGGGAAGTTATAGCAGTTTTAGATCAAGCTGGGAGCTTTGGAATTGTATATGGAGAATCATCTGATGGGGCAGTTTATGTGTACAAGAATGATGATGATGATGCAGGCTTGTCTTCTGCAATTCATCAATCTACACCATTAACTGTTCTTAGGAGGCTGACACTGGAAAAGAATGGAAATTTGCGTTTGTACCGTTGGGGTGATGTAAATGGATCAAAACAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGATATTTCTGGAATTTGTGGCAATGGGGTTTGTAACTTGGATAGAAGTAAGACAAATGCCTCTTGCACTTGCTTACCAGGAACTTCTAAAGTTGAGAGGGACGGTATATGCTATGAGAATTCATCTCTTGTTGGAAAATGCAATGGTCAAACTCGGAATGAAAACAAGACATCCCAGTTTAGGATGTCAATGGTGCAGCAAACTAACTATTATTTTTCTGAATCTTCAGTGATAGCTAACTATAGTGATGTTGCTTCAGTATCAAAATGTGGGGATGCTTGTTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGGCTAAATGAGGAGAGACCATACTGCTGGGTGTTGAGGAGCTTAAGTTTTGGTGGTTTTGAGGATACCAGCTCAACTTTATTTGTGAAGGTTAGAGCAAATGCATCATGGACACCAGAAGGACAAGCAAGAGGGTCTAATAATAGCTCTTCTGATGGAATGGGGAGTGCCAAGGAGAAGGCTGTGATTATTCCCATTGTGATGAGCATGACAGTTCTAATTGTTTTGCTATGTTTATTACTGTATTACAGTGTTCATAGAAAAAGAACTTTGAGAAGAGAGATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTCACCTACCGTGATTTGCAAATCAGGACAAGCAACTTTTCACAACTTCTAGGAACAGGTGGATTTGGAAGTGTGTATAAAGGAAGCCTAGGAGATGGTACCTTAGTGGCAGTGAAGAAACTTGATAGGGTTTTGCCCCATGGAGAGAAAGAATTTATCACTGAAGTAAACACCATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGTTCAGAGGGATCACACCGGCTTCTGGTTTATGAGTTCATGAAGAATGGATCTTTGGATAAATGGATCTTCCCTTCATATCAAGGGCGAGATAGATTGCTAGATTGGTCAACTCGTTTTGAAATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAGATAGGATAATACATTGTGACATCAAACCAGAAAATATATTGTTAGATGAAAACTTTTGTCCTAAAGTATCTGATTTTGGATTGGCCAAGTTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGGTGAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCTGATGTTTATAGCTATGGGATGCTTCTTTTAGAAATCATTGGTGGAAGGAGAAATCTTGACATGTCCTATGATGCAGAAGATTTCTTCTATCCTGGTTGGGCTTATAAGGAGATGACAAATGGATCACCACTCAAAGTGGCAGATAGAAGATTAAATGGGGCAGTTGATGAAGAAGAGCTTCTGAGAGCTCTGAAAGTTGCCTTTTGGTGCATCCAAGATGAGGTTTTTATGAGACCACCAATGGGGGAAGTGGTGAGAATGCTGGAAGGTTCAATCAACATTAATATGCCACCAATGCCACAAACAGTTGTAGAGTTAATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGAGTATAACCATTTCAGCTCATTCACCATTACCAGCCACCTTACATCTCATGCCACATGTAGCAATTCCACAATGTCACCAAGATAG 2598 0.4157 MASATSSFPCYWIVLTLVLGCFSSCISSQISLGSRLLASKDQTWVSDNGTFAMGFTPSDTDNRLFVLGIWFAELPGDRTIVWSPHRDSPVSQDAILELDTTGNLVLMDRDITTWASNTSGAGVVAAVMAESGNFILHNTNNHPVWQSFSQPSDTLLPNQPLTVSSELTSSKSSSHGGYYALKMLQQPTSLSLALTYNLLETYQDLDESYTNYSYWKGPDISNVTGEVIAVLDQAGSFGIVYGESSDGAVYVYKNDDDDAGLSSAIHQSTPLTVLRRLTLEKNGNLRLYRWGDVNGSKQWVPQWAAVSNPCDISGICGNGVCNLDRSKTNASCTCLPGTSKVERDGICYENSSLVGKCNGQTRNENKTSQFRMSMVQQTNYYFSESSVIANYSDVASVSKCGDACLSDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANASWTPEGQARGSNNSSSDGMGSAKEKAVIIPIVMSMTVLIVLLCLLLYYSVHRKRTLRREMESSLILSGAPMNFTYRDLQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWSTRFEIAIATAQGIAYFHEQCRDRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSYDAEDFFYPGWAYKEMTNGSPLKVADRRLNGAVDEEELLRALKVAFWCIQDEVFMRPPMGEVVRMLEGSININMPPMPQTVVELIEEGLDHVYKAMKREYNHFSSFTITSHLTSHATCSNSTMSPR. 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07648 865 SUPERFAMILY Protein kinase-like (PK-like) 511 806 IPR011009 -
Seca7g07648 865 Pfam D-mannose binding lectin 79 166 IPR001480 -
Seca7g07648 865 SMART blect_4 35 151 IPR001480 -
Seca7g07648 865 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Seca7g07648 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 182 IPR036426 -
Seca7g07648 865 ProSiteProfiles Protein kinase domain profile. 533 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07648 865 SMART serkin_6 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07648 865 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Seca7g07648 865 Gene3D Phosphorylase Kinase; domain 1 497 608 - -
Seca7g07648 865 CDD STKc_IRAK 539 807 - -
Seca7g07648 865 FunFam Serine/threonine-protein kinase 31 149 - -
Seca7g07648 865 CDD B_lectin 39 151 IPR001480 -
Seca7g07648 865 PIRSF SRK 2 856 IPR024171 GO:0004674
Seca7g07648 865 Gene3D - 23 150 IPR036426 -
Seca7g07648 865 Pfam S-locus glycoprotein domain 251 338 IPR000858 GO:0048544
Seca7g07648 865 FunFam S-receptor-like serine/threonine-protein kinase 502 608 - -
Seca7g07648 865 Gene3D Transferase(Phosphotransferase) domain 1 609 822 - -
Seca7g07648 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Seca7g07648 865 PANTHER OS07G0415500 PROTEIN 13 817 - -
Seca7g07648 865 Pfam Protein kinase domain 536 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07648 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07648 Seca-Chr7 180506542 180510894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07648 483 815 Receptor kinase-like Gene Family AT5G20050 42.778 4.26e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca7g07648 Pkinase 8.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07648 - - gmx:100794281 1521.91