Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07627 ATGCCTTTGCTGCTCCTATGGATCCATTTCTTTCTCTTCACCAACCTCATTTTCCCCTTACTTTCTGTCCCTTTCTTGCCTTCAGAAAATGTCACACTCTTTGGCGACGCCTTCTACAGTGACAACGCCATTAGTCTCACCAAGGAACTCCCTTGCCTTTCTTCTCCTTCTTCCCCTTCTTCTGGGATGGGAAGAGCTTTCTACGTATACCCAGTTCGCTTTCTTGATCCTGTGACAAACTCCACTGCTTCTTTCTCTTGCCGTTTCTCTTTCTCAATCTTTCCCTCACCTTCTTGCCCTTCTGGCGATGGCATTGCTTTTCTCATAGCCTCAAGCACCGATTTTTCAAGCCTCTCTCGTGGATATATGGGTCTTCCTGCACCTCTCCTTTTCAACCAACAAGATTCCTACTTTGCAGTGGAATTTGACACCAGTTTTGACCCTTCTCTTGGTGACATTAATGGGAATCACATTGGAATTGATGTCAATAGTGTCGTATCTTTGGCTTCTGTGGATGTTCTTTCTCGTGGAATTGACTTGAAAAGTGGGAAATTGATCACTGCTTGGATTGAGTACAGAGATTCCATGAAAATGGTTCGTGTGTGGGTTGGTTACTCTTCAACTAGGCCTCCAACTCCAATTCTTGTTTCCCAGATAGACCTTTCTGAGAAACTCAAGGAGTTCATGCATGTGGGGTTCTCTGCCTCTAATGGACAGGGCTCAGGTATCTACTTTGTTCATCATTGGCAATTCAAAACTTTGGGTGATTCCCCTTCAGTGAGTCCTATGGATATGGTAGAAGAAGGGGACTGCTTCTTGTGTTATGCAGGGGATTCAATCACATCCACCAAACACAATGGTGCAAATAACAGAAGGAAAAAGATTGAGGAGTTGGCTCTTGGATTGGGAGGGATAACAGCTTTTGTAGTGTCAGCATTGGCAGCAGTTTTTATGATCTGTGTTTTCTTGACAAGGAAAAAGGGTGTTGTTAGACAGAAAAAGGAAGGTCAAAGTTGTAGATTTCAGACAAATAAAGTGCCTATGAGATTGACACTTTCAGAGATCAAAGTGGCTACAATGGGGTTTAATAGAGATAGACTTGTTGGGGAAGGTGCATCAGCTAAGGTTTATAAAGGGTCTCTTCCATTTGGTGGTGATGTGGCAGTGAAAAGATTTGAGAGAGCTGATGATTTTGATTGTCTGCACAATCCATTTGCCACTGAGTTTGCAACAATGGTGGGTTATTTGAAGCACAAAAACTTGGTTCAGCTTAAGGGATGGTGTTGTGAGGGGAATGAGTTGGTACTGGTTTATGAGTACCTACCCAATGGGAGCTTGGATAAAGTTCTGCATAGAAACTTCAATTCTTCAATTGTTCTTTCATGGAAGCAAAGAGTTAATATAGTTCTAGGGGTTGCTTCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGGCAGATCATTCATAGAGATGTTAAGACTTGCAATATAATGCTTGATGCAGATTTCAATGCCAAGCTTGGGGATTTTGGACTTGCAGAAGTGTATGAACATAGTTCTATCACAAGGGATGCTACTATACCAGCAGGGACAATGGGTTATCTTGCTCCTGAATATGTGTATACTGGTGTTCCAACTGTAAAAACTGATGTGTATAGCTTTGGGGTAGTGATGATAGAAGTGGCAACTGGGAGGAAGCCTGTGGAAGATGATGGCACTGTGGTTGGTGATTATGTGTGGAACTTGTGGGAAAAGAACAAACTCCTTGAGGCTGCTGATCCAAGATTGATGGGGAAGTTTGATGCATTGGAGATGGAAAGGATGCTTCTGGTGGGGCTTCTTTGTGTACACCCTGATCATGAAAAGAGGCCAAGGGTGAGAGATGCAGCTAGAATGATTAAGAAAGAAGCAACACTTCCAATGTTGCCTCCAAGTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCAAATGATACACCAGAAACACAAACTGTGGTTGGGGATTGGCTCAGTTCAGAGGAGGCTCCATATTTGACTCCTAGGAGCCAGTTTTATCAGGACTTGTAA 2067 0.4301 MPLLLLWIHFFLFTNLIFPLLSVPFLPSENVTLFGDAFYSDNAISLTKELPCLSSPSSPSSGMGRAFYVYPVRFLDPVTNSTASFSCRFSFSIFPSPSCPSGDGIAFLIASSTDFSSLSRGYMGLPAPLLFNQQDSYFAVEFDTSFDPSLGDINGNHIGIDVNSVVSLASVDVLSRGIDLKSGKLITAWIEYRDSMKMVRVWVGYSSTRPPTPILVSQIDLSEKLKEFMHVGFSASNGQGSGIYFVHHWQFKTLGDSPSVSPMDMVEEGDCFLCYAGDSITSTKHNGANNRRKKIEELALGLGGITAFVVSALAAVFMICVFLTRKKGVVRQKKEGQSCRFQTNKVPMRLTLSEIKVATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFERADDFDCLHNPFATEFATMVGYLKHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNFNSSIVLSWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITRDATIPAGTMGYLAPEYVYTGVPTVKTDVYSFGVVMIEVATGRKPVEDDGTVVGDYVWNLWEKNKLLEAADPRLMGKFDALEMERMLLVGLLCVHPDHEKRPRVRDAARMIKKEATLPMLPPSKPRVRIRPICPNDTPETQTVVGDWLSSEEAPYLTPRSQFYQDL. 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07627 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Seca7g07627 688 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07627 688 SUPERFAMILY Protein kinase-like (PK-like) 346 650 IPR011009 -
Seca7g07627 688 FunFam L-type lectin-domain containing receptor kinase VIII.1 441 651 - -
Seca7g07627 688 FunFam L-type lectin-domain containing receptor kinase S.6 15 267 - -
Seca7g07627 688 PANTHER - 48 644 - -
Seca7g07627 688 Gene3D - 20 265 - -
Seca7g07627 688 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Seca7g07627 688 Gene3D Transferase(Phosphotransferase) domain 1 441 639 - -
Seca7g07627 688 Gene3D Phosphorylase Kinase; domain 1 323 440 - -
Seca7g07627 688 Pfam Protein kinase domain 363 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07627 688 CDD lectin_legume_LecRK_Arcelin_ConA 30 253 IPR001220 GO:0030246
Seca7g07627 688 SMART serkin_6 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07627 688 Pfam Legume lectin domain 28 259 IPR001220 GO:0030246
Seca7g07627 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 259 IPR013320 -
Seca7g07627 688 FunFam L-type lectin-domain containing receptor kinase S.6 326 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07627 Seca-Chr7 180227682 180229748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07627 5 684 Receptor kinase-like Gene Family AT5G42120 55.983 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g07627 Pkinase 6.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07627 - - lang:109346768 999.964