Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07622 ATGGATTTAGTTGAAGGCGTGGGAGAGAGCTCCTCGCCCCCGCGCACCTTCAGCGGTTACAGCAACTACGATGTAAGGAACGACGTCTACAATCGCTTGGTAGAAACTGGCCACGACCAAGCCGTGTCGAATCCCGAGTTTCGCGAACAGTTGGAAGCTCACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTTAATATCGATAGAGCTGAAGATGTTCTATTGCATCAGAGACTTCTTGCTTTGGCAAAAGACCCAGACAAGCGCCCCGTCTACCATATACGCTTCGTGGAGGATATTTCTACTAGAACAGATGGTGAAGAGCAGCAACTTGTAAGTAGTCATCCTAGCCTAGGGTCATCTTCTCATTCAACAAATGGTGGAGCTGTGTCATCTCATAAGAGGACCAGGGATCTTGCAGCTGAGTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGATGTTATAAAGAACTCAAAGGTTAAACACTATAATGTAAAATGCAGGCATGAACATTCAAGTGTCCCAGTTCATGAAATAATATTTTCCACTGTTGACAAGCCCAAGCTTTTAAGCCAGCTGTCCGCATTGCTGTCTGATATTGGGCTCAACATCCGTGAAGCACATGTTTTTTCCACAACTGATGGCTTCTCCCTTGACGTCTTTGTGGTGGATGGATGGCCTGTAGAGGAAACAGATGGTTTGTATGATGCTATGGAAAAAGCTGTAGCAAGAAGTGAGGGGTCATGGTCTCGTTCTTCAAATTCTCATTCAGCTGTGGAGAAAGCCTTAGCAGCAGAAGGAAAATCTGGAGATTGGGAAATAGACAGGAGGTTGTTAAAGATTGGAGAAAGAATAGCATCTGGATCCTGTGGAGATTTGTATCGTGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTTCTAAGATCTGAGCAACTGAATGATGCCTTAGAGGATGAGTTTGCTCAAGAAGTCGCTATTCTGAGGCAGGTGCATCATAAAAATGTTGTCCGTTTCATTGGCGCTTGTACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGCCTGGAGGAAGTTTATATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCAATTACTAAAGTTTGCAATTGATGTCTGCAAGGGCATGGAGTATTTGCATGGAAACAACATAATTCACAGGGATCTGAAGACGGCCAACTTGCTAATGGATACGCACAGTGTTGTTAAAGTGGCAGATTTTGGAGTTGCTCGGTTCCTAAATCAGGGGGGAGTGATGACAGCGGAAACTGGAACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCCTATAATCAAAAAGCAGATGTATTCAGTTTTTCCATAGTATTATGGGAACTAGTGACAGCAAAGGTACCATATGATACCATGACTCCTCTACAAGCTGCCTTGGGTGTAAGACAGGGACTGCGTCCAGAACTTCCAAAGCATGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGCAACCGTCCATCCTTTAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCAAGAAATGGAGGTAAACTGTATTAACTGTTATTTATTAAATATTATTACATCTTTTGTTACCTGA 1668 0.4275 MDLVEGVGESSSPPRTFSGYSNYDVRNDVYNRLVETGHDQAVSNPEFREQLEAHFNRLPPSYGLDVNIDRAEDVLLHQRLLALAKDPDKRPVYHIRFVEDISTRTDGEEQQLVSSHPSLGSSSHSTNGGAVSSHKRTRDLAAEFEPCSKLEDLNLDVIKNSKVKHYNVKCRHEHSSVPVHEIIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGFSLDVFVVDGWPVEETDGLYDAMEKAVARSEGSWSRSSNSHSAVEKALAAEGKSGDWEIDRRLLKIGERIASGSCGDLYRGVYLGEDVAVKVLRSEQLNDALEDEFAQEVAILRQVHHKNVVRFIGACTKCPHLCIVTEYMPGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGNNIIHRDLKTANLLMDTHSVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYNQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAIPSNRPSFNEIRVELENLLQEMEVNCINCYLLNIITSFVT. 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07622 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Seca7g07622 555 Pfam Protein tyrosine and serine/threonine kinase 282 529 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 136 536 - -
Seca7g07622 555 ProSiteProfiles ACT domain profile. 181 255 IPR002912 -
Seca7g07622 555 MobiDBLite consensus disorder prediction 106 134 - -
Seca7g07622 555 FunFam Serine/threonine-protein kinase isoform 1 272 360 - -
Seca7g07622 555 Gene3D Transferase(Phosphotransferase) domain 1 360 545 - -
Seca7g07622 555 Gene3D Phosphorylase Kinase; domain 1 271 359 - -
Seca7g07622 555 PRINTS Tyrosine kinase catalytic domain signature 393 411 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 PRINTS Tyrosine kinase catalytic domain signature 501 523 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 PRINTS Tyrosine kinase catalytic domain signature 356 369 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 PRINTS Tyrosine kinase catalytic domain signature 458 480 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 PRINTS Tyrosine kinase catalytic domain signature 439 449 IPR001245 GO:0004672|GO:0006468
Seca7g07622 555 SUPERFAMILY ACT-like 180 247 IPR045865 -
Seca7g07622 555 ProSiteProfiles Protein kinase domain profile. 282 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07622 555 SMART serkin_6 282 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07622 555 CDD STKc_MAP3K-like 288 526 - -
Seca7g07622 555 MobiDBLite consensus disorder prediction 107 133 - -
Seca7g07622 555 SUPERFAMILY Protein kinase-like (PK-like) 272 540 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07622 Seca-Chr7 180114308 180134343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07622 24 539 MAP Kinase Kinase Kinase AT2G17700 51.601 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca7g07622 PK_Tyr_Ser-Thr 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07622 - - gmx:100797987 959.903