Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07621 ATGTCTTTCAATGTTCCAATATGCACCGGGAGGTTACCTAGGTTAGTCAGCAATATTATCAAGCCTTCTATAGAAGAAGATAAGCATGAGGATATCCAAGAGAACAATGGACATGTGAACCTAACCAAGTGCACTGGAGAGACAAATGCTAATTTGGCTAAAATAATTACCGATTATGTGGGGACACTAAATCAAAACAAATTGCGCCTTTTGGGCTACCCCACTAATCTGGATTTCGATTATGCTGCATTGAAACCATTGTTACAATTTCACATAAACAATGCTGGCGATCCATTTCTAGGGAGCAGCTACTCTCTGAATTCATCAGCATTCGAAGTGTGCGTACTTGATTGGTTTGCAAATTTGTGGGAGATAGAGAAGAGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGCATTCTACTAGGGAGAGAACAATTTCCCGATGGGATCTTATATGCCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGCGTGAAGGTTGGCACTTTGGTGTCTGGTGAAATTGACTATGTTGAACTACATACTTCACTACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTAAACATAGGTCTTCCTCTCAAATGTTATTATAGTTTATTAGGAACAACTATGAAAGGAGCTATTGATGATGTTGATCTCACAATACAAACACTTGAGGAAAGTGGCTTCCCTCGCAATCGATTCTATATTCACTGCGATGGAGCTCTATTTGGAATGATGTTGCCGTTTCTTAAAAGAGCTCCAAGGACTACCTTCAAGAAGCCCATTGGAAGTATAGCCATTTCTGGCCATAAGTTCTTTGGATGCCCAATTCCTTGTGGTGTTGTAATAACTCGTTTACAACATATAAATGTTCTATCTAAAGATGTTGAATACATTGCTTCAAAGGATGTCACAATCACGGGTAGCCGTTGTGGGCATGCTCCAATGTTCCTCTGGTATGCTATCCAAGAGAGAGGTTTAATAGGATTTGAAAAGGAAGTGGAAATGTGCATAATGAATGCACGTCACTTACTGGATCAACTACGTCATGCTGGCATTGGTGCAATGTTGAATGGGTTTAGTAATACAATTGTTTTTGAAAGGCCCCTTGATGATGAATTTACGAGTAGGTGGAGTTTGGCTTGCAAAGGTAATATTGCACATGTGGTTGTAATGCAACATGTCACTATTGAAATGCTAGACTCATTTGTTATTGAACTAGTTCAACAACGACTCATTTGGTATCGAGATGGACTAAGAAAGCCTCCTTGCGTTGCAAATGATATTGGTGCAGAAAATTGTGCTTGTACTTTGCATAATTCTTCATTCTCATAG 1389 0.3952 MSFNVPICTGRLPRLVSNIIKPSIEEDKHEDIQENNGHVNLTKCTGETNANLAKIITDYVGTLNQNKLRLLGYPTNLDFDYAALKPLLQFHINNAGDPFLGSSYSLNSSAFEVCVLDWFANLWEIEKSEYWGYVTTGGTEGNLHGILLGREQFPDGILYASEDSHYSIFKIARMYRMQCVKVGTLVSGEIDYVELHTSLLAHKDKPAIINLNIGLPLKCYYSLLGTTMKGAIDDVDLTIQTLEESGFPRNRFYIHCDGALFGMMLPFLKRAPRTTFKKPIGSIAISGHKFFGCPIPCGVVITRLQHINVLSKDVEYIASKDVTITGSRCGHAPMFLWYAIQERGLIGFEKEVEMCIMNARHLLDQLRHAGIGAMLNGFSNTIVFERPLDDEFTSRWSLACKGNIAHVVVMQHVTIEMLDSFVIELVQQRLIWYRDGLRKPPCVANDIGAENCACTLHNSSFS. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07621 462 Pfam Pyridoxal-dependent decarboxylase conserved domain 110 369 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca7g07621 462 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 282 303 IPR021115 GO:0016831
Seca7g07621 462 SUPERFAMILY PLP-dependent transferases 69 426 IPR015424 -
Seca7g07621 462 Gene3D Aspartate Aminotransferase, domain 1 341 429 IPR015422 GO:0003824
Seca7g07621 462 PANTHER - 41 458 - -
Seca7g07621 462 Gene3D - 87 340 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07621 Seca-Chr7 180101546 180104407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07621 219 358 Calmodulin-binding Proteins AT1G65960 28.571 7.05e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07621 K25193 - gmx:100784867 657.136