Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07611 ATGGACAAGGACATGGCAATGGTTTTCATTCCAGCAGCTCATGCCACGGAGCCTTTGAGCAATGCCGAGCTCTCTAGAGAAGAAGAGACACAGATAGACATTGATGATCAAGCTGAGAATAATAAACATATCAACCTGCTTGCTATCACCGATCAGTGCACTACTGGCGAGACACAAGACAATTTGTCTGCAGTGATTACTCACTACGTCCACACTCTAAATCAATACAACTCTCGCAACTTAGGCTACCCCACTAATCAGGACTTCAACTATGACGCATTAGCACCGTTGCTTCATTTTCACCTAAACAATGCTGGCGATCCATTTCTAGGTAGCAGCTTCTCTCTGAATTCAACAGCATTTGAAGTGTCGGTGCTTGATTGGTTTGCGAATCTGTGGGAGATAAAAAAGAGTGAATATTGGGGGTATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGGATTCTAGTAGGGAGAGAACAATTTCCAGATGGAATCTTATATACTTCAAAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTACCGAATGGAGTGCGTGAAAGTTGGTACTTTAGTGTTTGGTGAAATCGATTGTGTTAAACTACAGACTTCACTACTTGCTCACAAGAACAAGCCAGCCATCATCAATCTAAACATAGGGTTCAATCCTCCTACTGTAGGGACGACTATGAAAGGAGGTGTTGATGACCTTGATCTTGTCATACGAACACTTGAGAAATGCGGTTTCACTCAAGATCGATTCTATATTCACTGTGATGGAGCCCTACTTGGAATCATGTTGCCTTTCCTCAAACAAGCACCAAGGATCACCTTCAAGAAACCCATTGGAAGTGTAACTGTATCTGGTCACAAGTTCTTGGGATGCCCAATTCCTTGTGGTATTGTGATAACTCGTTTAAAATATATCAATGCACTATCTAAAGATATTGAAATCATTGCTTCAAGAGATGCCACAATCACAGGTAGCCGTAGCGGGCATGCTCCAATCTTCTTCTGGTATGCTATCAAAAAAAGGGGGTTAATAGGACTCAAGAACGAAGTACAGAAATGCATAATGAATGCACGTTACTTGCATGATCGACTACGTGATGCCGGTGTTGGTACGATGTTAAATGAGTTTAGCAACACAGTTGTCTTTGAGAAGCCCTTGGATGATGACTTTACTCGTAGGTGGAATCTAGCATGCAAAGGAAATATTACACATGTGGTGGTGATGCAACACGTTACCATTGAAATGCTTGACTTCTTTGTTAGTGAATTTCTTCAAAAGCGATCCATATGGTTGAAAGATGGACGTTCTCTGTACTTATCAGAGACGAATGCAGAGGGGGCAGCCAGGGGACTTGACCCCCTTCCCTTGCTCCTATAA 1401 0.4204 MDKDMAMVFIPAAHATEPLSNAELSREEETQIDIDDQAENNKHINLLAITDQCTTGETQDNLSAVITHYVHTLNQYNSRNLGYPTNQDFNYDALAPLLHFHLNNAGDPFLGSSFSLNSTAFEVSVLDWFANLWEIKKSEYWGYVTTGGTEGNLHGILVGREQFPDGILYTSKDSHYSIFKIARMYRMECVKVGTLVFGEIDCVKLQTSLLAHKNKPAIINLNIGFNPPTVGTTMKGGVDDLDLVIRTLEKCGFTQDRFYIHCDGALLGIMLPFLKQAPRITFKKPIGSVTVSGHKFLGCPIPCGIVITRLKYINALSKDIEIIASRDATITGSRSGHAPIFFWYAIKKRGLIGLKNEVQKCIMNARYLHDRLRDAGVGTMLNEFSNTVVFEKPLDDDFTRRWNLACKGNITHVVVMQHVTIEMLDFFVSEFLQKRSIWLKDGRSLYLSETNAEGAARGLDPLPLLL. 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07611 466 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 288 309 IPR021115 GO:0016831
Seca7g07611 466 PANTHER - 25 443 - -
Seca7g07611 466 Gene3D - 98 346 IPR015421 GO:0003824
Seca7g07611 466 Gene3D Aspartate Aminotransferase, domain 1 347 435 IPR015422 GO:0003824
Seca7g07611 466 Pfam Pyridoxal-dependent decarboxylase conserved domain 118 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca7g07611 466 SUPERFAMILY PLP-dependent transferases 73 432 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07611 Seca-Chr7 179998881 180003073 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07611 230 376 Calmodulin-binding Proteins AT3G17760 29.114 1.66e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07611 K25193 - gmx:100781665 678.322