Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07609 ATGAAAGGAGCTGTTGATGACATTAATCTCGTAATACAAACACTTGAGGAAAGTGGCTTCTCTCGTGATCGATTTTATATTCACTGTGATGGAGCTCTATTTGGAATGATGTTGCCATTTCTTGAACAAGGTCCAAAGATTACATTCAAGAAGCCCATTGGAAGTATAACCATTTCAGGCCATAAATTTTTGGGTTGCCCAATTCCGTGTGGTGTTGTAATAACTCGGTCGGAACACAGCAACAGTACTCTATCTGGAGATGTTGAAGTGATTGCTTCTAGGGATGCCACAATCACAGGTAGCCGAAGTGGGCATGCTCCAATCTTCATTTGGTATGCTCTGCAAAAGAAAGGGCTAATAGGTCTCAAGAATGAAGTGCAAAAGTGCATACTTAATGCACAATACTTATTTGGTCAACTGCGTGGAGCTGGCATTGGCACAATGTTAAATGAATTTAGCAACATTGTTGTCTTTGAGAGGCCTTTAGACGATGAATTTGCTCGTAGGTGGAATTTAGCATGCAAAGAAAATATTGCACATGTGGTGGTGATGCAACATGTTACTATTAAAATCTTGGACTCCTTTGTTAGTGAACTTATACAAAAGCGAGCGATTTGGTTCCAAGATGATTTGAGAAAGCCTCCCTGCCTTGCAAATGAAATTGGTGCTGGAAATTGTTCTTTATATTGCATGATTGATTCTCATGGGATGGAATGA 717 0.3989 MKGAVDDINLVIQTLEESGFSRDRFYIHCDGALFGMMLPFLEQGPKITFKKPIGSITISGHKFLGCPIPCGVVITRSEHSNSTLSGDVEVIASRDATITGSRSGHAPIFIWYALQKKGLIGLKNEVQKCILNAQYLFGQLRGAGIGTMLNEFSNIVVFERPLDDEFARRWNLACKENIAHVVVMQHVTIKILDSFVSELIQKRAIWFQDDLRKPPCLANEIGAGNCSLYCMIDSHGME. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07609 238 PANTHER - 1 227 - -
Seca7g07609 238 Pfam Pyridoxal-dependent decarboxylase conserved domain 3 142 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca7g07609 238 Gene3D Aspartate Aminotransferase, domain 1 114 203 IPR015422 GO:0003824
Seca7g07609 238 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 55 76 IPR021115 GO:0016831
Seca7g07609 238 Gene3D - 1 113 IPR015421 GO:0003824
Seca7g07609 238 SUPERFAMILY PLP-dependent transferases 2 201 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07609 Seca-Chr7 179939444 179942210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07609 1 132 Calmodulin-binding Proteins AT1G65960 27.857 4.32e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07609 K25193 - gmx:100781665 353.984