Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07608 ATGGAATCTGATCATTCATCCCTCAACCACACCAAATTTGTCCATCCAAACAATGACCCTGAACAACATGCAACTCTAGAGATTGAAAGTGAGGAATTTGATTACTCAAAAAGATCCCAATGGCTACGTGCTGCTGTTTTAGGAGCCAATGATGGGTTGGTCTCTACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAGGTAATGATCTTATCAGGTTTTGCAGGGCTGGTAGCAGGGGCATGTAGCATGGCCATAGGGGAGTTTGTGTCAGTGTACTCACAATTGGACATAGAAGTTGCTCAATTGAAAAGAGACAAAGAACAAAGAGGAGAAAGAGAAGGAGAAGATGACAAAGAGAAAGAAAGCTTACCAAACCCTTTACAAGCAGCAGCAGCCTCAGCTTTAGCATTTTCAGTTGGTGCAATGGTTCCCCTGCTTGCAGCCTCTTTTATAAGAGATTATAAGGTAAGGCTTGGAGTGGTTTTGGGAGCAGTTAGCTTAGCTTTGGTGGTGTTTGGTTTGTTGGGAGCAGTGTTGGGTAAGGCTCCTGTATTGAGGTCTTGTTTGAGGGTCTTGATTGGGGGTTGGTTAGCCATGGCTGTAACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGGGCTTTAG 660 0.4455 MESDHSSLNHTKFVHPNNDPEQHATLEIESEEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQLKRDKEQRGEREGEDDKEKESLPNPLQAAAASALAFSVGAMVPLLAASFIRDYKVRLGVVLGAVSLALVVFGLLGAVLGKAPVLRSCLRVLIGGWLAMAVTFGLTKLIGSSGL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07608 219 Pfam VIT family 124 211 IPR008217 GO:0005384|GO:0030026
Seca7g07608 219 Pfam VIT family 42 122 IPR008217 GO:0005384|GO:0030026
Seca7g07608 219 CDD Nodulin-21 40 188 - -
Seca7g07608 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 214 IPR008217 GO:0005384|GO:0030026
Seca7g07608 219 MobiDBLite consensus disorder prediction 109 129 - -
Seca7g07608 219 MobiDBLite consensus disorder prediction 1 22 - -
Seca7g07608 219 MobiDBLite consensus disorder prediction 109 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07608 Seca-Chr7 179889424 179890083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07608 1 219 Nodulin-like Gene Family AT3G43660 67.123 1.47e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07608 K22736 - gmx:100814343 309.301