Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07602 ATGGAAGGGAATTTGTCACAGGGAGGAATAATTCAAGGTGGGACTTCTTTTGGTGGCTTTGATTTGCCAGGATCATTACAGGTTCATCATCATCAAGCACAGCATCCCCATACCATGCACCAACATCCGCGTCAAGGGACTTCTGTACATTCCTCGGTTCATGATTGTTTTCCACTTACAATGGGAAATTTGCAGAACTGTGATCAAACCATTTCACTGACAGATTTTAGTAAGGGAGATCGAAGCAAAAACTCAGCAAGTGATGAAGATGAGCCAAGCTTTACTGAGGATGGTGTTGATTGTCACCATGAAGCAGGTAGAGGTAAAAAGGGCTCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAAGCTTTTGATAACAGCTGTTTCTTATATTGGTGAGGATATAACTTCTGATGGTAGTGGCTGTGGAAGAAGGAAATTTGCAGTCCTACAGAAGAAGGGTAAGTGGAAATCCATTTCCAAGGTCATGGCTGAGAGGGGTTATCATGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTTCTCTGTTGGATGTCATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTATCATAATGGTAATAGATTGCATTTACCCCATGATCCTGCATTGCAACGATCATTGCAGATAGCTCTCCGAAACAGAGATGATCATGATCATGATGATATCAGAAGGTCCCATCATGATGATCATGACGATGATGAGCAAGATGGGGAAATGGATGATCATGATGATTTTAAAGAGACTTGTACTTCCCATGGTGATAGTAGAGGAATATTTGGGCCATTTGGTGGATCTATGAAGAAATTGAAACAGGGCCAAGGTCATGAAGATGCTAATACTTTTGGTAGTTCTTTAAATTGTCAAGGCTACAACAAAAATTCATATCCCCATGGACAGATGGTCCAATCTGATGTTAATCAAGCTTCACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGTTCACTTCAATTGGAAGAGCAAAAGCTACAACTTCAGGTTGAGATGTTGGAGCTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGCAAGAAAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAATCAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAACGAAAGGAAATGGGCACCAGCTTTAACTAG 1341 0.4042 MEGNLSQGGIIQGGTSFGGFDLPGSLQVHHHQAQHPHTMHQHPRQGTSVHSSVHDCFPLTMGNLQNCDQTISLTDFSKGDRSKNSASDEDEPSFTEDGVDCHHEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDITSDGSGCGRRKFAVLQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQIALRNRDDHDHDDIRRSHHDDHDDDEQDGEMDDHDDFKETCTSHGDSRGIFGPFGGSMKKLKQGQGHEDANTFGSSLNCQGYNKNSYPHGQMVQSDVNQASPESMRAAWLQKQWVESRSLQLEEQKLQLQVEMLELEKQRFKWQRFSKKKDRELEKLSLENQRMKLENERIALELKRKEMGTSFN. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07602 446 Gene3D - 119 191 - -
Seca7g07602 446 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
Seca7g07602 446 MobiDBLite consensus disorder prediction 81 113 - -
Seca7g07602 446 Coils Coil 408 440 - -
Seca7g07602 446 MobiDBLite consensus disorder prediction 270 285 - -
Seca7g07602 446 Coils Coil 378 400 - -
Seca7g07602 446 MobiDBLite consensus disorder prediction 1 52 - -
Seca7g07602 446 MobiDBLite consensus disorder prediction 270 305 - -
Seca7g07602 446 Pfam Myb/SANT-like DNA-binding domain 116 242 IPR044822 -
Seca7g07602 446 MobiDBLite consensus disorder prediction 76 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07602 Seca-Chr7 179826507 179827847 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g07602 Myb_DNA-bind_4 6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07602 - - gmx:100816474 737.643