Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07588 ATGGCGTCGTCGAAGCTGATGCCGTCTTCCGATTCAACAAAGTCTGATTCCAAACCCCAATTCACCACCGCCACTTTCATGCCCATTTCCGACCACGCCGTTGATTCCACCCTCCTCGACGCTCAAATCTCCCTCGTCGACACTGCCGCAGCAGCAGCTCCCCCCAAAACCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGAACGCAGGGAGTTCAAGGAGGAAGCTCCCGACGAGATGATGACCCTCGAGGATTTCCTCGTTAAGGCCGGCGCCGTCGACGACGACGACGACGACGACGAGGTCAAGATGCCGGTCCCCCTCACCGAGAGGCTGAGTGGCAGTGCCGGCGGAGGTGTATTTGCGCTCGATCCTCCTCCGTTTCAGGGGATGGAGAGCGTTGAAGGGTCGGTGATTGGGTTTGGGAATGGGGTGGAGGTGGTTGAAGGAGGGAGAGGGAAGAGGGGGCGCCCCGTTTTGGAGCAATTGGATAAGGCTGCGCAGCAGAGGCAGAGGAGGATGATCAAGAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCCTTGGCGGTGAAGCTAGAGGAAGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAAGAAAAAGGAGAGGTTCAAGCAGCTTATGGAGAAAGTGATCCCTGTTGTGGAGAAGCGGAGGCCACCACGTTTACTCCGTAGGCTTTCACATTCCACCACAATTCTAGTAGATGGATCTTCAGAGTGGAAGAACCCCACTGTCAACATTGGTGATTCCATAACTTTCAAGCACAAGCAACACTACAGCCTCTACATTTTCAAGAACCAGGAAGCATTCAATCTCTGCAATTTCACTCAAGCCACTATCCTCACCAGTCCCAACACTACCTCTTACACGTGGCATCCATCCCGCCCTGGTTTCTTCTACTTTACCTTCAACAATGGCTCACTCAAATCATGTCAAGATTCTCAAAAGCTAGCCATAAAGGTTACTCCAGCAGTAGCAGCACCACCACCACAAAGTTCAGAACTTTCTCCAATAGCAACTCCAGCTCCCTCTTCTGGTGGAGATGTACCATCTTCCCCTTCATTCCCATGGCCATTCCGTCCTCCCCAAGCAGCATCACCTGGTCCAGCACCAACTGCAACAGTTCCATTAGTACCAGACAAAGGTGGTGGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACAGGTGAAGTAGATTCTGCTACCATACGCCCACTACCCACCTCTGGTAATCAAGGACAGGTGATGATGATTGGGTCATTTGGATTTCCTATTGCTGTGCACACCATGGCTTTACTGCTGCTGTAA 1374 0.5255 MASSKLMPSSDSTKSDSKPQFTTATFMPISDHAVDSTLLDAQISLVDTAAAAAPPKTVDDVWREIVAGERREFKEEAPDEMMTLEDFLVKAGAVDDDDDDDEVKMPVPLTERLSGSAGGGVFALDPPPFQGMESVEGSVIGFGNGVEVVEGGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAEKKKERFKQLMEKVIPVVEKRRPPRLLRRLSHSTTILVDGSSEWKNPTVNIGDSITFKHKQHYSLYIFKNQEAFNLCNFTQATILTSPNTTSYTWHPSRPGFFYFTFNNGSLKSCQDSQKLAIKVTPAVAAPPPQSSELSPIATPAPSSGGDVPSSPSFPWPFRPPQAASPGPAPTATVPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPTSGNQGQVMMIGSFGFPIAVHTMALLLL. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07588 457 MobiDBLite consensus disorder prediction 344 393 - -
Seca7g07588 457 MobiDBLite consensus disorder prediction 373 393 - -
Seca7g07588 457 CDD bZIP_plant_BZIP46 170 208 - -
Seca7g07588 457 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 220 IPR004827 GO:0003700|GO:0006355
Seca7g07588 457 Coils Coil 189 228 - -
Seca7g07588 457 Gene3D - 247 343 IPR008972 -
Seca7g07588 457 PANTHER OS04G0422700 PROTEIN 241 455 - -
Seca7g07588 457 Pfam bZIP transcription factor 168 224 IPR004827 GO:0003700|GO:0006355
Seca7g07588 457 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 168 226 - -
Seca7g07588 457 MobiDBLite consensus disorder prediction 356 370 - -
Seca7g07588 457 MobiDBLite consensus disorder prediction 1 21 - -
Seca7g07588 457 SUPERFAMILY Leucine zipper domain 170 221 IPR046347 GO:0003700|GO:0006355
Seca7g07588 457 SMART brlzneu 166 228 IPR004827 GO:0003700|GO:0006355
Seca7g07588 457 SUPERFAMILY Cupredoxins 248 340 IPR008972 -
Seca7g07588 457 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Seca7g07588 457 Gene3D - 168 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07588 Seca-Chr7 179577410 179584778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07588 35 245 bZIP Transcription Factor Family AT5G44080 51.852 6.64e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g07588 bZIP_1 3.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07588 - - gmx:100800621 311.997