Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07574 ATGATTCAACCTGCCCTGAACTTGAATCCATCATCAGATCAGAGCTCAAGAAGGTCTTCAACAAGGATATTGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGAATGAAAATGCAGGGTTGTGATGCGTCAGTTTTGTTGGATGGATCAGCAAGTGGACCAAGTGAGAAAGATGCACCCCCCAACTTAAGCTTAAGGGCAACAGCTTTTAAGATTATCGAAGACCTTCGTGACCGTGTTGAAAAGAAGTGTGGTAGAGTTGTCTCCTGTTCCGACATCACTGCCATTGCCGCACGTGATGCTGTTTATCTTTCAGGAGGACCAGACTATGAAATTCCCTTAGGAAGGAGAGATGGGTTAACCTTTGCCACAAGGAATGTCACATTGGAAAACCTTCCAGCACCCTCAAGCAACACCACTACCATCCTAAACTCTCTTGCTAAAAAAAACTTTGATCCCACTGATGTTGTTGCACTCTCAGGTGGCCACACCATAGGCATAAGCCACTGCAGTTCTTTCACTGACAGACTCTATCCTACCCAAGACCCTGTCATGGACAAAACCTTTGGAAAAAACCTCAAACTCACTTGCCCCACTTCCAACACAGACAACACCACAGTCCTTGACATCCGAAGCCCCAACACTTTTGATAACAAATACTATGTTGACCTCATGAATCGCCAGGGTCTCTTCACCTCTGACCAAGATTTGTACACTGATAAGAGAACCAAGGACATTGTCACCAGCTTTGCTGTGAACCAAACTCTGTTCTTTGAGAAGTTTGTGACTGCTATGCTCAAAATGGGTCAGCTTAATGTATTGACAGGAACTCAAGGGGAGATTCGTGCCAATTGCTCTGTCAGGAATAAGGATAGCAAATCCTTCTTGACTTCTGTTGTGGAAGATGTGGTGGAAGGATTGATAGAAATGTAG 951 0.449 MIQPALNLNPSSDQSSRRSSTRILVKLLACFAFTSMTALFRMKMQGCDASVLLDGSASGPSEKDAPPNLSLRATAFKIIEDLRDRVEKKCGRVVSCSDITAIAARDAVYLSGGPDYEIPLGRRDGLTFATRNVTLENLPAPSSNTTTILNSLAKKNFDPTDVVALSGGHTIGISHCSSFTDRLYPTQDPVMDKTFGKNLKLTCPTSNTDNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTKDIVTSFAVNQTLFFEKFVTAMLKMGQLNVLTGTQGEIRANCSVRNKDSKSFLTSVVEDVVEGLIEM. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07574 316 PRINTS Haem peroxidase superfamily signature 94 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Haem peroxidase superfamily signature 112 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Haem peroxidase superfamily signature 161 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 Pfam Peroxidase 32 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PANTHER - 44 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 Gene3D Peroxidase, domain 2 140 275 - -
Seca7g07574 316 Gene3D - 44 292 - -
Seca7g07574 316 SUPERFAMILY Heme-dependent peroxidases 40 297 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 ProSiteProfiles Plant heme peroxidase family profile. 44 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 161 171 IPR019793 -
Seca7g07574 316 FunFam Peroxidase 139 274 - -
Seca7g07574 316 CDD secretory_peroxidase 45 293 IPR033905 GO:0004601|GO:0042744
Seca7g07574 316 PRINTS Plant peroxidase signature 269 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 213 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 93 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 74 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 33 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 229 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 112 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g07574 316 PRINTS Plant peroxidase signature 160 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07574 Seca-Chr7 179425534 179427689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07574 44 316 Peroxidase AT1G71695 64.469 2.48e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07574 K00430 - gmx:100775837 468.774