Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07555 ATGGAAAATATTGTCCCTCATAGTGTTACTACTGTGTTATTTTCCTTACTCTTCTTTTGCCTCACCTTGAATAAGATAGAAGTCACTTGTCTCTCACCTGATGGACAAGCCCTTCTTTCTCTTCTGTCTGCAGCTGGTCCTGCTGCAAAATCATCACCTTCTGTGCTATCCTCATGGAATCCATCAAGCTCAACACCATGTTCATGGAAGGGCATTACTTGCTCCCCACAAGTGTTGCAACTTCTCAATCTTTCTTCCACTAATGTCTCTGGCTCCATCCCACCCTCTTTTGGTCAACTTTCTCATCTTCAACTCCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTGCTGAACTTGGAAGGCTTTCTTCCCTTCAGTTTCTTTTCTTGAACTCTAACAGATTGACAGGAAGCATTCCTCAACATCTTTCCAACCTTACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTTAATGGTTCAATCCCATCACAGTTAGGCTCTTTGATATCTCTGCAGCAGTTTAGGATTGGGGCCACTGGACTTTCTGGTGCCATTCCCTCTTCATTTGGGAACTTGATCAATCTCCAAACATTAGCACTTTATGATACTGAAATTTCTGGTTCTTTACCACCAGAACTTGGGTTGTGTTCTGAGTTGAGAAATATTTATTTGCACATGAATAAGCTCACTGGCACTATCCCTCCTCAATTAGGCAAGTTGCAAAAACTTACAAGCTTGCTTCTTTGGGGAAATGCATTATCTGGGCCAATACCAGCTGAGCTTTCCAACTGCTCATCACTTGTGATATTTGATGTCTCTTCTAATGACCTCTCTGGTGAAATACCTGGGGACTTTGGGAAGCTAGTGGTTCTGCAACAGCTTCATCTATCAGACAATTCACTCTCAGGTAAAATACCATGGCAGTTGAGCAACTGCACGAGCCTTGCCACTGTTCAGCTTGACAAGAATCAATTATCAGGTACAATTCCATGGCAGATTGGAAAATTGAAACTTTTGCAGAGTTTTTTCTTGTGGGGTAATTTAGTATCTGGAACCATACCATCCTCTTTTGGAAACTGCACAGAACTTTATGCACTTGACCTTTCAAGGAACAAGCTTACAGGTTTTATCCCAGATGAAATTTTCAACTTGAAGAAGCTGAGTAAGCTTCTGCTTCTGGGAAATTCATTAACAGGAAGGTTGCCACCAAGTGTTGCAAACTGTCAGTCTCTAGTGAGGTTGAGGGTTGGAGAGAACCAACTTTCAGGACAGATTCCTAAAGAGATAGGCCAATTGCAGAATCTAGTGTTTCTTGACTTGTACATGAATCATTTCTCTGGAAGCTTACCAGAAATTCCATCTGTGATTGGAGAACTTGAAAATTTGGAGCAGCTTGATCTCAGCCGAAATAGTTTGACAGGTGAAATTCCTTGGAGTTTTGGAAACTTCAGTTATTTGAACAAGCTCATCCTCAACAATAATTTGCTGACAGGATCAATCCCAAAATCCATTAAAAATTTGCAGAAGCTAACTCTATTAGATTTGAGTTATAACAGCCTCTCTGGTGGCATACCCTCTGAGATTGGTCATATTACAAGCTTAACCATTAGTTTGGACTTAAGCTCAAATGCATTCACAGGAGAAATCCCAGAATCATTGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAATTTGCTTTATGGAGGAATTAAGGTTCTTGGTTCTCTTACTAGTCTCACTTCACTCAATATCTCCTACAACAACTTCTCAGGTCCTATCCCTATAACTCCATTCTTCAGAACTCTATCTTCAAATTCATATCTTCAGAACTCCCATCTATGTCAGTCCATTGATGGAACTACATGTTCTTCAAGTCTGATCCGAAAAAATGGTTTAAAATCTGCAAAAACTGTAGCTTTGGTCATGGTAATTCTAGCCTCAGTTACCATAATTGTCATTGCATCATGGATTCTAGTAACTAGGAATCACGGATACAAGGTTGAGAAGACTTTGGGGGCATTAGCTTCCACATCAGGAGTTGAGGATTTCTCTTATCCTTGGACTTTCATCCCTTTTCAAAAACTGAACTTCAGCATAGATAACATCTTGGATTGCTTGAAGGATGAAAATGTGATTGGAAAGGGTTGTTCTGGTGTTGTGTATAAGGCTGAGATGCCAAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAAAGCAGATGAAAGAGAAACTATGGATTCTTTTGCAGCAGAGATCCAGATTCTGGGGTACATTCGGCATAGGAACATTGTGAGGCTCTTAGGTTATTGTTCTAACAGGAGTGTTAAGCTTCTTCTCTATAACTATATCCCAAATGGTAATTTACGACAGCTTTTGCAAGACAACAGGAATTTAGACTGGGAAACTAGATACAAGATTGCTGTTGGGTCAGCTCAAGGTCTAGCTTACCTTCATCATGATTGTGTCCCAGCAATTCTTCACAGAGATGTTAAGTGCAATAACATACTCCTAGATTCCAAATATGAGGCATATCTAGCAGATTTTGGTCTTGCAAAGCTCATGCATTCACCAAATTATCATCAAGCAATGTCCAGAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGCTAGAGATATTAAGTGGGCGTAGTGCTGTTGAATCCCATGTTGGAGATGGACAACACATAGTTGAATGGGTGAAGAGAAAGATGGGAAGCTTTGAACCAGCAGTATCAATACTAGATGCAAAGCTACAAGGACTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAACTCTTCCCCAGCAGAGCGCCCCACTATGAAGGAAGTGGTAGCACTACTAATGGAGGTGAAGAGCCAGCCTGAGGAAGTGGGGAAGAGTACCTCTCAACCTCTAATAAAGCAGTCCTCAACTCAAAGCTGA 3042 0.4096 MENIVPHSVTTVLFSLLFFCLTLNKIEVTCLSPDGQALLSLLSAAGPAAKSSPSVLSSWNPSSSTPCSWKGITCSPQVLQLLNLSSTNVSGSIPPSFGQLSHLQLLDLSSNSLTGSIPAELGRLSSLQFLFLNSNRLTGSIPQHLSNLTSLEVLCLQDNLLNGSIPSQLGSLISLQQFRIGATGLSGAIPSSFGNLINLQTLALYDTEISGSLPPELGLCSELRNIYLHMNKLTGTIPPQLGKLQKLTSLLLWGNALSGPIPAELSNCSSLVIFDVSSNDLSGEIPGDFGKLVVLQQLHLSDNSLSGKIPWQLSNCTSLATVQLDKNQLSGTIPWQIGKLKLLQSFFLWGNLVSGTIPSSFGNCTELYALDLSRNKLTGFIPDEIFNLKKLSKLLLLGNSLTGRLPPSVANCQSLVRLRVGENQLSGQIPKEIGQLQNLVFLDLYMNHFSGSLPEIPSVIGELENLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNLLTGSIPKSIKNLQKLTLLDLSYNSLSGGIPSEIGHITSLTISLDLSSNAFTGEIPESLSALTQLQSLDLSHNLLYGGIKVLGSLTSLTSLNISYNNFSGPIPITPFFRTLSSNSYLQNSHLCQSIDGTTCSSSLIRKNGLKSAKTVALVMVILASVTIIVIASWILVTRNHGYKVEKTLGALASTSGVEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKANKADERETMDSFAAEIQILGYIRHRNIVRLLGYCSNRSVKLLLYNYIPNGNLRQLLQDNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMHSPNYHQAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDAKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSQPEEVGKSTSQPLIKQSSTQS. 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07555 1013 Gene3D Ribonuclease Inhibitor 179 340 IPR032675 -
Seca7g07555 1013 Gene3D Ribonuclease Inhibitor 341 631 IPR032675 -
Seca7g07555 1013 SUPERFAMILY RNI-like 285 615 - -
Seca7g07555 1013 Pfam Leucine rich repeat 79 137 IPR001611 GO:0005515
Seca7g07555 1013 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Seca7g07555 1013 Pfam Leucine rich repeat 343 401 IPR001611 GO:0005515
Seca7g07555 1013 PRINTS Leucine-rich repeat signature 463 476 - -
Seca7g07555 1013 PRINTS Leucine-rich repeat signature 103 116 - -
Seca7g07555 1013 SMART serkin_6 713 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07555 1013 ProSiteProfiles Protein kinase domain profile. 713 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07555 1013 Gene3D Phosphorylase Kinase; domain 1 687 792 - -
Seca7g07555 1013 MobiDBLite consensus disorder prediction 993 1013 - -
Seca7g07555 1013 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Seca7g07555 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Seca7g07555 1013 SUPERFAMILY RNI-like 77 378 - -
Seca7g07555 1013 MobiDBLite consensus disorder prediction 995 1013 - -
Seca7g07555 1013 SMART LRR_typ_2 196 220 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 560 587 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 436 459 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 511 535 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 463 486 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 292 316 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 100 124 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 364 388 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 148 172 IPR003591 -
Seca7g07555 1013 SMART LRR_typ_2 244 268 IPR003591 -
Seca7g07555 1013 Gene3D Ribonuclease Inhibitor 31 178 IPR032675 -
Seca7g07555 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 375 988 - -
Seca7g07555 1013 Gene3D Transferase(Phosphotransferase) domain 1 793 1009 - -
Seca7g07555 1013 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 31 179 - -
Seca7g07555 1013 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 793 1004 - -
Seca7g07555 1013 SMART LRR_sd22_2 124 150 - -
Seca7g07555 1013 SMART LRR_sd22_2 560 585 - -
Seca7g07555 1013 SMART LRR_sd22_2 511 530 - -
Seca7g07555 1013 SMART LRR_sd22_2 463 492 - -
Seca7g07555 1013 SMART LRR_sd22_2 100 121 - -
Seca7g07555 1013 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 694 792 - -
Seca7g07555 1013 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 385 633 - -
Seca7g07555 1013 Pfam Protein kinase domain 715 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07555 1013 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 180 382 - -
Seca7g07555 1013 SUPERFAMILY Protein kinase-like (PK-like) 699 987 IPR011009 -
Seca7g07555 1013 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07555 Seca-Chr7 179132530 179136029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07555 28 991 Receptor kinase-like Gene Family AT5G56040 43.541 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g07555 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07555 - - gmx:100819611 1634.77