Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07552 ATGCATTCCCACTTAGAGAGAATCCTGTGGAGCGAGGACCAAATCTCTCGCCGAGTCTCCGACCTCGCCGGTCAAATCGCCGCCGACTTTCTCGCCTCTTCTCCGCCGCCCGTTTTTGTCGGCGTTGCCACCGGCGCATTCCTCTTCCTTGCCGACCTCGTTCGTAAAATCGACCTCCCCATCACCGTTGATCTCGTCCGTGCTGAATCCTACGGTTCCGGAACTGTATCCAATGGCGCACCGACCATTTCTACCGATTTGAAGGTTGACATCAAAGGCCGCCATGTCGTCTTGGTTGAAGACGTTGTAGACACAGGATATACTTTATCTAGAGTCATTGCACACTTGAAATCAAAAGGAGCATCCTCTGTCTCTGTATGCACTCTCCTCGATAAACCAGCAAGGAGAAAAGTTAATATACAATTGGTGGGTAAAGGGAAATTCTACCGGGGATTTGAGGTGTTGCACATTGAACATGATATCTGA 486 0.5 MHSHLERILWSEDQISRRVSDLAGQIAADFLASSPPPVFVGVATGAFLFLADLVRKIDLPITVDLVRAESYGSGTVSNGAPTISTDLKVDIKGRHVVLVEDVVDTGYTLSRVIAHLKSKGASSVSVCTLLDKPARRKVNIQLVGKGKFYRGFEVLHIEHDI. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07552 161 CDD PRTases_typeI 22 145 IPR000836 -
Seca7g07552 161 SUPERFAMILY PRTase-like 1 143 IPR029057 -
Seca7g07552 161 Gene3D - 1 157 IPR029057 -
Seca7g07552 161 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 2 154 - -
Seca7g07552 161 Pfam Phosphoribosyl transferase domain 15 138 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07552 Seca-Chr7 179104273 179107452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07552 1 156 PRT Gene Family AT1G71750 64.331 2.54e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07552 K00760 - gmx:100797406 245.743