Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07544 ATGGGTGCTGCTTCGGAATCTGCTTCTGCTGAGTGTTTCAGCAAGGTGATGTCGTCTATGCCCGGTTTTCGCTTCCATCCCACGGATGAAGAGCTGATCATGTACTATCTGAAACGGAAAATTTGCGGGAAGAAGCTGAAGTTCAACGTGATTTGCGAAACCGATGTGTACAAATGGGATCCTGATGACTTGCCTGGGCAATCTTCTCTGCAAACTGGTGATAGGCAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAATGGTGGGAGGTCTAACCGAGCAACAAGACATGGGTACTGGAAAGCAACAGGAAAAGATCGAAACATAACATACAATTCTCGGGCAGTTGGAGTGAAGAAGACACTGGTTTTTTATGTAGGCAGAGCTCCTAACGGTGAGCGGACTGATTGGGTTATGCATGAATACACCATGGATGAAGCGGAGCTTAAGAGATGCCAGGGTGTTAAGGACTATTATGCACTTTACAAGGTTTACAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTCAAAGAAGAAGAGTGGGCAGATGACAATGTTGTAGATTTTAATATTAACCCAGCTGACCAGGTGGCTCCAAATGCCGTCACTGACCCTGTTAATGATGAGTTGCAGCCTTTGTGTAATGATGAAATTGATGAGATCATTAGAGGATTTTTGGATTGTGAGCCTATCCTTGACCAACATGTGAATGGTTATCCTGACTTTCCTCAGGTTGTTGCTGAAGAAACACCAAGTATGGTTGTGGGTCAATTCTCTGAGGCTGCGATATTCTCTGAGCCAAGTGGAATTTTTCAGTCTAGCAGTCAGCATTATGATGTACAGCCCAGCTTTGACTTCAATCACTCGGTTACTTCTCACCTGCATGTTTCTGAAGCACCTGAGGTCACTTCTGCTCCCAACATTCAAAGAGAGGAGGAACTTCACTTTCATGAAGATGGCTTCTTGGAAATTAATGATCTCATTGATACTGAACCTACATTGTCAAATATAGAAAATCCTGTGGAGAACCTGCAGTTTGAAGATGGGTTAAGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTCCGTGACTTGGAGCATGAAACTGTTTCACATGCATATATGAGTACTGTTGACAGCAATATTGAAAATCAAACTTACCAGTTGCTGCCCAATCCAGGGGATGCCAATCAAACTGTCGGTGAATTCTGGATGCATGATGAAAGAAACATCCTGAGTGCATCCGAAGGCTATGCTGGTTCTTTCTCTCCACCAATCCCAGGTATCGTATGTGAATCCGTCAACTTTCCTACTGAAGGCAATCAAAATCAAAGTAGCACTGTGGAAGATGTTAGTACAAGTAGATTCTCCTCTGCTCTCTGGGCATTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATGCTTTGGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCAGGGTGAAGATCAAGCACACCACCGTTGCTGCAGGTAAAGACACTGCAACTGTGAAGAGAGCAGGCATGAGGGGAGTTTCATTCATTTTCTTTCCGATTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATTGGAAATTTAAGACTATTAGGGAGATGCATCTCTCCATGA 1674 0.4349 MGAASESASAECFSKVMSSMPGFRFHPTDEELIMYYLKRKICGKKLKFNVICETDVYKWDPDDLPGQSSLQTGDRQWFFFCHRDRKYPNGGRSNRATRHGYWKATGKDRNITYNSRAVGVKKTLVFYVGRAPNGERTDWVMHEYTMDEAELKRCQGVKDYYALYKVYKKSGPGPKNGEQYGAPFKEEEWADDNVVDFNINPADQVAPNAVTDPVNDELQPLCNDEIDEIIRGFLDCEPILDQHVNGYPDFPQVVAEETPSMVVGQFSEAAIFSEPSGIFQSSSQHYDVQPSFDFNHSVTSHLHVSEAPEVTSAPNIQREEELHFHEDGFLEINDLIDTEPTLSNIENPVENLQFEDGLSELDLFQDAEMFLRDLEHETVSHAYMSTVDSNIENQTYQLLPNPGDANQTVGEFWMHDERNILSASEGYAGSFSPPIPGIVCESVNFPTEGNQNQSSTVEDVSTSRFSSALWAFVESIPTTPASAAENALVNRALNRMSSFSRVKIKHTTVAAGKDTATVKRAGMRGVSFIFFPILIALCAFLWVSIGNLRLLGRCISP. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07544 557 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Seca7g07544 557 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Seca7g07544 557 SUPERFAMILY NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Seca7g07544 557 FunFam Nac domain-containing protein 86 28 172 - -
Seca7g07544 557 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Seca7g07544 557 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07544 Seca-Chr7 179007024 179011999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07544 5 555 NAC Transcription Factor Family AT1G34190 42.931 3.40e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g07544 NAM 7.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07544 - - gmx:100794925 880.552