Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07540 ATGGGGTTACCTTCAACATCATTAGACAATAGCTGGTGGGTGTTTACACTTCCAGCCATAGCAGGAACACAAAATTTTCTTAACAACATTCTGATCTTAACACTCATCCTAATTGCACTTCTCTTCATTGGGTATGCTATCCCAAGAGGAGGGGGTATAGCATGGAGAAATGGAAGGAACCAAATGGGTAAGGTCCCAATTCCAGGACCCAGAGGTTTCCCAATCTTTGGCATCTTATTCACCTTAACCCAAGGCTTACCTCACCATACACTTGCTTCCATGGCTTCAACATTCTCTGCCACAAAACTCATGGCCTTTAGTTTAGGCTCAACCCCTGCAGTTATCACCTCAGACCCTCACATAGCACGTGAAATCTTGAACTCACCCCATTTTGCTAACCGTCCAATTAAACAATCTGCTAAAACCCTTATGTTCAATCGTGCCATTGGTTTTGCACCAAACGGCACTTATTGGCGTTTGCTTCGTAAGGTTGCCTCAACCCATCTTTTCTCTCCAAAACGCATTGCCGCTCATGAGCCCGGTCGCCGCCGTGATTGCGCCGCCATGTTGGCCGCTGTGACTCATGAACAAACCAAAAATGGATTCGTTTGTTTGAGAAAACATCTCCTAGATGCAGCTCTTGATAACATTATGGGCACTGTTTTTGGAAGAAGGTATGGCCAAGAAGAGTGCCGTGATAGATATGAAGTTGAGGAGTTGCATGAGATGGTGAGGGAAGGGTTTGAGGTTTTAGGAGCATTTAATTGGTCTGATTATGTTTCTTGGATCAGCTTCTTTTATGACCCTTTTCGTATTCGAGAAAGGTGCAGTGCTCTGGCTCCTCGTGTTAAGAAATTTGTGAAGACGGTTTTGGATGAGCACCGAATGGCTCCATTCAAAGAACTTTGTGATGGCTCTGATTTTGTGGATGTTTTGCTCTCTTTACAAGGAGATGAGAAGCTCCAAGATGACGACATGATTGCCATTTTATGGGAGATGATATTTCGTGGCACGGATACAACAGCACTTCTTACTGAATGGATAATGGCTGAGCTTGTTTTGAACCAACAAGTTCAGACAAGGCTTCGTGAAGAGATTGACAGGGTTGTGGGAGACAAAAAGGATGTTACAGATGCTGATGTGATGAAAATGCCATACCTTGAAGCCATTGTGAAAGAGACATTGAGAGTGCATCCAATTGGGCCACTTCTTTCATGGGCCCGTTTGTCCACGTCAGATGTCCAGCTCAGCAATGGGATGGTGGTCCCGGCCAACACCACAACCATGGTGAATATGTGGGCCATAACTCATGACCCCAATGTGTGGGAGGAGCCATTGGTGTTCAAACCAGAGAGGTTTTTGAAGAGTGAAGGAGGGGTTGAAGTGGATGTGAGGGGTGCTGACCTCAGGCTTGCACCATTTGGAGCTGGACGTAGGGTTTGCCCAGGTAAGAACCTTGGTCTTGTGACTGTGAGCCTTTGGGTGGCTAAGTTGGTTCACCAATTTCAATGGTTCCAAGACATGGCTAACCCTGTTGACCTCACTGAGGTGCTCAAGCTATCTTGTGAGATGAAGAACCCCCTCAAAGCTGTGGCAATTCCCTGCAGGGTTGTTTAA 1617 0.4601 MGLPSTSLDNSWWVFTLPAIAGTQNFLNNILILTLILIALLFIGYAIPRGGGIAWRNGRNQMGKVPIPGPRGFPIFGILFTLTQGLPHHTLASMASTFSATKLMAFSLGSTPAVITSDPHIAREILNSPHFANRPIKQSAKTLMFNRAIGFAPNGTYWRLLRKVASTHLFSPKRIAAHEPGRRRDCAAMLAAVTHEQTKNGFVCLRKHLLDAALDNIMGTVFGRRYGQEECRDRYEVEELHEMVREGFEVLGAFNWSDYVSWISFFYDPFRIRERCSALAPRVKKFVKTVLDEHRMAPFKELCDGSDFVDVLLSLQGDEKLQDDDMIAILWEMIFRGTDTTALLTEWIMAELVLNQQVQTRLREEIDRVVGDKKDVTDADVMKMPYLEAIVKETLRVHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWAITHDPNVWEEPLVFKPERFLKSEGGVEVDVRGADLRLAPFGAGRRVCPGKNLGLVTVSLWVAKLVHQFQWFQDMANPVDLTEVLKLSCEMKNPLKAVAIPCRVV. 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07540 538 SUPERFAMILY Cytochrome P450 67 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Seca7g07540 538 CDD CYP78 99 528 - -
Seca7g07540 538 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 Pfam Cytochrome P450 68 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PANTHER CYTOCHROME P450 78A7-RELATED 10 534 - -
Seca7g07540 538 FunFam Cytochrome P450 78A5 59 535 - -
Seca7g07540 538 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07540 538 Gene3D Cytochrome P450 54 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07540 Seca-Chr7 178965716 178967931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07540 7 531 Cytochrome P450 AT5G09970 64.151 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07540 K20619 - pvy:116124806 770