Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07521 ATGATGTTCCAAGTGTGCCTTTTCATCTTCTCCACTGTCATCTCCACCATTGCAGGAACCACCACCATCTCACCAGGCACAACCCTCTACGCTTCCCACACCACCCAATTATGGTCCTCTCCCAACAACACATTCTCTCTCCACTTCCTTCCCCTCCACCCCCAAACTTCCCCTCCTTCCTTCATCGCCGCCATTGTCTACTCCGGCGGCTCACCCCTCATTTGGTCCGCCGGAAACGGTACCACCGTGGACTCTGGCGGTTCCCTCCAGTTCCTTCCAGCCGGAAACCTCCGCCTCGTTAATGGGTCAGGCTCCACCGTGTGGGACTCTGGAACTTCCAACATGGGTGTCTCCTCTGCCATGCTTCATGACAATGGAAATTTGGTTCTCTCCAATGGCACTGACACTGTGTGGTCAAGCTTTGACAACCCCACTGATACCATTGTGCCTACTCAAAACTTCACTGTTGGTATGTTTTTGCGTTCTGGGTTGTACTCCTTTTCTGTTCTTAGGTCCGGGAACCTCACCCTCAAATGGGGTGATAGTGTGCCTTACTGGGAACAGGGTCTAAACTCTTCCATGAGTTTGGTGAATTTGAGTTCACCTGTTTTGGGGTTGCAACCAGTAGGAATTTTGCAGCTTTTTGATCCAAAATTGATTGCCCCTGTGATGGTTGCTTACAGTGATGACTATAATGAAGGGAATGATGATATGTTAAGGATTTTGAAGTTGGATGGTGATGGGAATTTAAGGATTTATAGCTCTAAGAAAGGTAGTGGGACTGTGACTGTGAGATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTATTGTGGAAATAATGGTATTTGTAGTTATAATAATTCCAACCCCATTTGTGGATGTCCATCTCAAAATTTTGAGATGGTTGATCCTAATGATAGTAGGAAAGGGTGTATGAGGAAGGTGAGGCTTGAGGATTGTGAAGGGAAGGTGGCTATGTTGCAAGTGGACCATGCTCGATTCTTGACATATCCTCCTCAGTTTATGATCAATCCTGAGATATTTTTCATTGGTATATCAGCTTGCCGTGGAAATTGTCTTTCAGCCAGTTCTTGTTTTGGTTCTACTTCCTTGTCAGATGGAACTGGATTATGTTACATAAAGACCTCTAATTTTATTAGTGGCTACCAGAATCCAGCTCTACCTAGCACTTCATATATCAAGGTTTGTGGACCATTGGCTCCAAACTCACCACCTTCTTTGGAGAATGCTGGGGAGGGGAAGGATAGGAGGATACATGCTTGGATAGTTGCTGTAGTTGTTTTGAGTACCCTTTTAGCTTTCCTTGCCTTTGAGGGTGGTTTATGGTTGTGGTGCTGTAGAAATAGCCCAGGATTGGAAGGATTAGCTGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCCCCAGTTCATTTCTCTTACAAGGAGCTCCAAAGGTCAACAAAAGGGTTCAAGGAGAAACTTGGTGATGGGGGATTTGGTGCTGTATATAGAGGAGTTCTTGCAAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGGCATTGAGCAGGGTGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACACATCATCTGAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACAGGCTTCTAGTATATGAATTTATGAAAAATGGATCTCTTGATAACTTTCTTTTTGTTGGTGAACAGCAGTCAGGAAAAGTATTGAATTGGGGGTATAGATACACCATTGCCTTAGGTGCTGCTAGGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTGTTAAGTCCAAGGGATCACAGGCACCGGACCTTGACAAGTGTGAGAGGTACCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAACCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAAGCAGAAAAAAGTTTTCCATTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGACAGAAGAATGGTTAGCCAAGAAGTCAACTTGGAACAAGCAAAAAGAGTGCTTCTGGCATGTTTTTGGTGCATACAGGAGCAGCCATCTCAGAGGCCTACAATGGGCAAAGTTGTGCAAATGCTAGAAGGTGTGATAGATATTGATAGGCCACCAGCCCCAAAATTAATTACAGTAGGATCTTCTGGTGGAATCAATGGTAGTGTCACTCCTATCTCCACTATTGCAACCTCACCGTCTCCAACTTTCTCGCCATCTTCATCTTTGTTGACTTGA 2445 0.4405 MMFQVCLFIFSTVISTIAGTTTISPGTTLYASHTTQLWSSPNNTFSLHFLPLHPQTSPPSFIAAIVYSGGSPLIWSAGNGTTVDSGGSLQFLPAGNLRLVNGSGSTVWDSGTSNMGVSSAMLHDNGNLVLSNGTDTVWSSFDNPTDTIVPTQNFTVGMFLRSGLYSFSVLRSGNLTLKWGDSVPYWEQGLNSSMSLVNLSSPVLGLQPVGILQLFDPKLIAPVMVAYSDDYNEGNDDMLRILKLDGDGNLRIYSSKKGSGTVTVRWVAVEDQCEVFGYCGNNGICSYNNSNPICGCPSQNFEMVDPNDSRKGCMRKVRLEDCEGKVAMLQVDHARFLTYPPQFMINPEIFFIGISACRGNCLSASSCFGSTSLSDGTGLCYIKTSNFISGYQNPALPSTSYIKVCGPLAPNSPPSLENAGEGKDRRIHAWIVAVVVLSTLLAFLAFEGGLWLWCCRNSPGLEGLAAQYALLEYASGAPVHFSYKELQRSTKGFKEKLGDGGFGAVYRGVLANQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVGEQQSGKVLNWGYRYTIALGAARGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLLSPRDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEISEETSRKKFSIWAYEEFEKGNIMGVIDRRMVSQEVNLEQAKRVLLACFWCIQEQPSQRPTMGKVVQMLEGVIDIDRPPAPKLITVGSSGGINGSVTPISTIATSPSPTFSPSSSLLT. 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07521 814 MobiDBLite consensus disorder prediction 793 814 - -
Seca7g07521 814 SMART serkin_6 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07521 814 CDD B_lectin 22 144 IPR001480 -
Seca7g07521 814 Gene3D Transferase(Phosphotransferase) domain 1 566 773 - -
Seca7g07521 814 SUPERFAMILY Protein kinase-like (PK-like) 474 766 IPR011009 -
Seca7g07521 814 ProSiteProfiles Bulb-type lectin domain profile. 14 143 IPR001480 -
Seca7g07521 814 FunFam S-receptor-like serine/threonine-protein kinase 465 565 - -
Seca7g07521 814 Gene3D - 16 142 IPR036426 -
Seca7g07521 814 Gene3D - 143 266 IPR036426 -
Seca7g07521 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 775 - -
Seca7g07521 814 Pfam S-locus glycoprotein domain 231 297 IPR000858 GO:0048544
Seca7g07521 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Seca7g07521 814 ProSiteProfiles Protein kinase domain profile. 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07521 814 SMART blect_4 20 144 IPR001480 -
Seca7g07521 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 143 - -
Seca7g07521 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Seca7g07521 814 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Seca7g07521 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 144 268 - -
Seca7g07521 814 Gene3D Phosphorylase Kinase; domain 1 465 565 - -
Seca7g07521 814 CDD STKc_IRAK 497 767 - -
Seca7g07521 814 Pfam Protein kinase domain 494 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07521 814 PIRSF SRK 1 797 IPR024171 GO:0004674
Seca7g07521 814 PANTHER OS07G0415500 PROTEIN 7 777 - -
Seca7g07521 814 Pfam D-mannose binding lectin 75 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07521 Seca-Chr7 178783524 178785968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07521 430 775 Receptor kinase-like Gene Family AT5G20050 40.984 1.04e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca7g07521 Pkinase 9.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07521 - - gmx:100810753 1326.23