Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07512 ATGGACACCAAACAAAACAACCACACTAAGCCTTCTTCTCTCCACGTCGAGGCTCCTCCTCCGGAGCCCAGCCCTCTCCGTAAGATCATCGTGGTGGCTTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTACAACTCTCTCTTCTCACTCCTTATGTTCAGTTACTTGGTATCCCTCACACTTGGGCCGCCTTTATCTGGCTCTGCGGCCCAATCTCCGGCATGCTGGTTCAGCCCATCGTTGGCTACCACAGTGACCGTTGCACCTCACGCTTCGGTCGCCGCCGTCCTTTCATCGCCGCCGGCGCACTCGCCGTCGCCATCGCCGTCTTCCTGATCGGCTATGCCGCCGATTTCGGTCACATGTTCGGCGACTCCTTAGAGAAAAAAACTCGCCCTCGTGCCATCGCTATCTTCGTCGTTGGATTCTGGATCCTCGACGTCGCTAACAACATGCTCCAAGGACCATGCCGTGCACTCCTCGCCGACCTCTCCGCCGGCGATCACCGGAAAACGCGAAACGCCAACGCGTTTTTCTCCTTCTTCATGGCCGTCGGCAACGTCCTCGGGTACGCCGCCGGAGCCTACAGTGGCCTCCACCACATATTCCCGTTCACCAAAACTAAAGCCTGTGACGTTTACTGCGCGAACTTGAAGAGCTGCTTCTTCCTCTCCATTGCGCTGCTTTTGACGCTGGCCACCGGCGCCATGATCTACGTGAAGGAAGAAGCGCTGTCGTCCAAGAAAACCGTCGGTGGAGACGCCGACGAGGATGGTGCGAGTTCAGGCGGTGGCATGCCATGTTTTGGGCAGTTATTCGGTGCTTTTCGTGAACTGAAAAGGCCGATGTGGATCCTTTTATTGGTGACGTGTCTTAACTGGATTGCGTGGTTCCCTTTCTTGTTGTTCGACACTGATTGGATGGGGAGAGAAGTTTATGGAGGAACGGTTGGGGAAGGTAAAGCCTATGATATGGGTGTGCGCGCGGGTGCACTGGGACTCATGTTAAACTCCTTGGTGCTTGGTGCGACGTCGTTGGGAGTGGAAGTTTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTGTGGGGAATCGTTAACTTCTTGCTTGCGATTTGTTTGGCCATGACGGTTTTGGTCACAAAAATGGCGGAACATTCGCGACGCTTCGTCCCCGGCCAGCAGGACCCTCTCCCGCCGTCCGGTGGCATCAAGGCCGGCGCGTTGACTCTCTTCTCCGTCCTCGGAATCCCTCTTGCGATTACTTACAGTATACCCTTTGCTCTGGCCTCTATATTCTCCAGCACCTCAGGGGCAGGCCAAGGTTTATCTCTGGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGGTCAGTGGACCGTGGGATGCTCTGTTTGGTGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCTGTGGCCGCTGCAGCCAGTGGCATATTATCCATAATTCTACTGCCGTCTCCACCACCGGATTTGGCCAAGGCTGCAACCGCTGCCGGAGGAGGCTTCCATTAA 1548 0.562 MDTKQNNHTKPSSLHVEAPPPEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADFGHMFGDSLEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANAFFSFFMAVGNVLGYAAGAYSGLHHIFPFTKTKACDVYCANLKSCFFLSIALLLTLATGAMIYVKEEALSSKKTVGGDADEDGASSGGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDMGVRAGALGLMLNSLVLGATSLGVEVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKMAEHSRRFVPGQQDPLPPSGGIKAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVVSGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07512 515 PANTHER SUGAR TRANSPORTER 26 495 - -
Seca7g07512 515 CDD MFS_SLC45_SUC 29 475 - -
Seca7g07512 515 Gene3D MFS general substrate transporter like domains 23 509 IPR036259 -
Seca7g07512 515 MobiDBLite consensus disorder prediction 1 22 - -
Seca7g07512 515 FunFam Sucrose transport protein 23 496 - -
Seca7g07512 515 NCBIfam sucrose/proton symporter 25 501 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca7g07512 515 Pfam MFS/sugar transport protein 37 241 - -
Seca7g07512 515 SUPERFAMILY MFS general substrate transporter 27 500 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07512 Seca-Chr7 178680389 178683669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07512 22 515 Sucrose Transporter Gene Family AT1G22710 70.200 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07512 K15378 - gmx:547679 892.108