Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07502 ATGCCAACAGCAACGTTTGGTGCTGTAGAAACTCCAAATGGAGACTCATCCAACACTCATGCCCTTTCCAAACACAGCCCTCAAGAATTGCGTGACCTCCCACCTTTTCTGTCATCTTCTTATCCCATCACTCTTAAGTTCATGGACGTGGGATACCGATTGAAGATAGAGAACAAACAAGGAAGCGGAGGGTGCATCAAGAAATTTTTTACCACGCTCGAGTCATCACCGTCAACGGTGAGAGCACCACAAGAGCGAACCATTCTGAACGGCGTAACGGGGATAGCTTACCCAGGGGAGATCCTAGCCATCCTGGGCCCATCAGGGAGTGGAAAATCAACGCTCCTAAACGCGCTTGCAGGGAGGCTCCATGGAAACGGCCTCACTGGAACAATCCTCGCTAACTCGTCCAAACTCAACAAATCAGTTCTCCGGCGAACCGGATTCGTTACACAGGACGACATCCTCTACCCTCACCTAACTGTCCGCGAGACTCTGGTGTTCTGCTCCATGCTGCGCCTCCCCAGGACGCTGCCGCGTGCGGCGAAGGTGGCGGCGGCAGAGTCGGCGATCGCGGAGTTAGGGCTGGGGAAGTGCCAGGACACTATAATAGGAAACAGCTTCATCCGCGGCGTTTCCGGTGGAGAGAGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCGGCGTTGCTGATCCTGGACGAGCCTACCTCTGGCCTGGACTCAACGGCGGCGCACCGCCTTGTGTCGACGCTGGGATCGCTGGCGAAGAAGGGGAAGACGGTGGTGACGTCGGTGCACCAACCTTCAAGCCGCGTGTACCAGATGTTCGACAAAGTGCTGGTTCTGTCGGAAGGTCACTGTTTGTATTTCGGCAAAGGAAACGACGCCATGCGCTACTTCGAGTCGGTTGGGTTCGCGCCATCTTTCCCGATGAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTTGAAGGTCTAAGTGAAAGAGATAGGCCAAACATAAAACAGAGCCTGGTTAATTCATACAACACAGTACTGGGTCCCAAGGTCAAAGCTGCCTGCATGGACACTACCAATGTTACAGCAAAAAACACACGCCCTTTGAGAAGCAACTCTTCAAAAGAACCTAGACATAGTGACAGGGTTAACTTCTTTGATTGGTTTTACCAATTCAGTATTCTGCTACAGAGAAGCCTCAAAGAAAGAAAATATGAATCTTTCAACACTCTGAGAGTCTTTCAAGTTATTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGACTATAGGAATATTCAAGATAGGCTTGGCTTACTCTTCTTCATTTCCATCTTTTGGGGAGTCTTCCCATCTTTCAACTCTGTTTTTGCATTCCCTCAAGAACGTGCAATCTTTATGAAAGAAAGGGCTTCTGGTATGTATACATTGTCATCATATTTTATGGCTCGAATTGTTGGAGATCTACCCATGGAGCTTATTCTTCCCACCATTTTCCTCATTATCACATATTGGATGGGTGGATTAAAGCCTGATTTGTGGGCTTTTCTGTTGACTCTGTTGGTTGTTCTTGGATACGTGCTTGTGTCACAGGGTCTTGGCCTTGCTTTAGGTGCAGCAATAATGGATGCCAAACAGGCTTCCACAGTTGCAGCAGTGACAATGCTAGCATTCGTTTTAACAGGTGGATACTATGTTCACAAGGTGCCATCTTGTGTGGCTTGGATCAAATATATATCTACAACTTTTTACGGTTATAAATTGATGATTAGAATACAATATGGGGATGGCAAGAAAATATCACATCTATTGGGATGCTATCATGGTGGAGGTGAGGCTAGCTGCAAGTTTGTTGAAGAAGATGTGGTGGGGCAAATTGGCACTGTGGGAAGCATTGGGGTGTTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCCTTGAGGCGCATCAAGAGTTGA 1992 0.4839 MPTATFGAVETPNGDSSNTHALSKHSPQELRDLPPFLSSSYPITLKFMDVGYRLKIENKQGSGGCIKKFFTTLESSPSTVRAPQERTILNGVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGNGLTGTILANSSKLNKSVLRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRTLPRAAKVAAAESAIAELGLGKCQDTIIGNSFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLVSTLGSLAKKGKTVVTSVHQPSSRVYQMFDKVLVLSEGHCLYFGKGNDAMRYFESVGFAPSFPMNPADFLLDLANGVCHVEGLSERDRPNIKQSLVNSYNTVLGPKVKAACMDTTNVTAKNTRPLRSNSSKEPRHSDRVNFFDWFYQFSILLQRSLKERKYESFNTLRVFQVIAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTIFLIITYWMGGLKPDLWAFLLTLLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCVAWIKYISTTFYGYKLMIRIQYGDGKKISHLLGCYHGGGEASCKFVEEDVVGQIGTVGSIGVLFFMFVFYRLLAYLALRRIKS. 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07502 663 SMART AAA_5 98 289 IPR003593 GO:0016887
Seca7g07502 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 312 IPR003439 GO:0005524
Seca7g07502 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 655 - -
Seca7g07502 663 Gene3D - 73 306 IPR027417 -
Seca7g07502 663 FunFam ABC transporter G family member 22 77 306 - -
Seca7g07502 663 Pfam ABC-2 type transporter 396 601 IPR013525 GO:0016020|GO:0140359
Seca7g07502 663 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g07502 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 305 IPR027417 -
Seca7g07502 663 Pfam ABC transporter 90 240 IPR003439 GO:0005524
Seca7g07502 663 MobiDBLite consensus disorder prediction 1 24 - -
Seca7g07502 663 Pfam ABC-2 type transporter 269 349 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07502 Seca-Chr7 178541770 178548518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07502 69 326 Calmodulin-binding Proteins AT2G36910 27.178 3.02e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07502 K05681 - gmx:100812127 1108.2