Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07498 ATGGGAATTTCTTCACAGCCTTCTTTGAAAGATCTGCTTCAGGGAACTGAAGAAAACAGGAATTCATCATATGGGTATTTGTGGAGCAAAGTCTTGGCTGCACAAGTGAAGAAGCAGAAGATCATGAAGAAAAGTTTCAACAATAGGAGGTCAAGAACAAAAAGGGTGTTGATGAAGAGAAGGGGTGGTTCTAGAAGAGGATCCAATTCCAATGGGATACAGAGACGTGTGAGAACATTGAAGAGCCTTATACCAAATAGTAATAACTCCATGGGGTTGGATGGACTCTTCAGAGACACAGCTGATTACATATTGGCTTTACAAACGAGAGTGAGAGTCATGCAGGTTATGGTTGAGGTATTGACAGGGTATGATGACTGA 381 0.4147 MGISSQPSLKDLLQGTEENRNSSYGYLWSKVLAAQVKKQKIMKKSFNNRRSRTKRVLMKRRGGSRRGSNSNGIQRRVRTLKSLIPNSNNSMGLDGLFRDTADYILALQTRVRVMQVMVEVLTGYDD. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07498 126 CDD bHLH_AtIBH1_like 63 118 IPR044549 GO:0006355
Seca7g07498 126 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 121 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07498 Seca-Chr7 178487524 178487904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07498 49 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 54.545 5.43e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07498 - - gmx:100794627 147.902