Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g07497 | ATGCAGAGGTACGGTTTTGCATCAAAATCTTCTTCAAAATGCAATACTGTTTTGCCATATCAAACCCCAAGGCTGAGGGACCACTACCTTCTTGGGAAGAAGCTTGGGCAAGGCCAATTTGGCACCACATACCTCTGCACCCACAAAGCCACAGGGAAACTCTATGCCTGCAAATCCATCCCAAAGAGGAAGCTTTTGTGCCAAGAGGATTATGATGATGTATGGAGAGAGATTCAGATCATGCACCATTTGTCAGAGCACCCAAATGTGGTCCAGATACAGGGAACCTATGAGGATTCTGTGTTTGTGCACCTGGTCATGGAGCTCTGTGCTGGGGGTGAACTTTTTGATAGGATAATTCAGAAGGGGCATTACAGCGAGAAAGAGGCTGTAAAGTTGATAAAGACCATTGTTGGGGTGGTGGAGGCATGTCACTCTCTTGGGGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCCTGGTGAAGATGCTAAGATGAAGGCCACAGATTTTGGCCTCTCTGTGTTCTACAAGCCAGGACAAGCCTTTCATGATGTAGTTGGAAGTCCCTACTATGTTGCCCCTGAGGTGTTGTGCAAGCAATATGGACCAGAAGTGGATGTATGGAGTGCTGGTGTTATCCTATACATCTTGTTGAGTGGGGTCCCACCTTTCTGGGCTGGTAATGATCCTAATATGGATTGTGATTCTCTTGGACTTGCACTTGTTAAGCTTTTCTTGCTACATTCACCTTTTCTATTACCTTCAGAAACAGAATCAGGAATTTTCAGGCAGATTTTACATGGAGAGCTTGATTTTGTATCTGAACCATGGCCAAGTATCTCAGAAAGTGCTAAAGATTTGGTAAAACAGATGTTGGAAAGGGACCCTACGAAAAGACCTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTTGATGATACAGTTGCCCCTGACAAACCTCTGGATTCAGCTGTTTTGACACGCCTAAAGCATTTTTCAGCAATGAATAAACTCAAGAAGATGGCACTGCGTGTCATAGCAGAAAGACTTTCAGAGGAAGAAATAGGTGGGTTAAAAGAGTTATTCAAGATGATTGACACAGACAACAGCGGGACCATAACTTTTGAGGAACTCAAGGATGGTTTGAAAAGTGTGGGCTCTAATCTCATGGAATCTGAAATTAAATCCCTTATGGATGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTTGCTGCTACTCTGCACTTGAATAAGATGGAAAGAGAGGAGAATTTGGTTGCAGCTTTTGCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAACAGGCTAGTAAAGACTTCGGCCTAGGTGATGTACATCTGGATGAAATGATCAAAGAGATTGATCAAGACAATGATGGAAGAATTGATTATGGGGAGTTTGTAGCGATGATGAAAAAGGGCGATGTAGATGCTATTGGAAGGAGCAGAACCATGAAAGGCAATTTGAACTTCAATATTGCAGATGCATTTGGAGTGAAAGAATCTTCTTGA | 1581 | 0.4276 | MQRYGFASKSSSKCNTVLPYQTPRLRDHYLLGKKLGQGQFGTTYLCTHKATGKLYACKSIPKRKLLCQEDYDDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEKEAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDTPGEDAKMKATDFGLSVFYKPGQAFHDVVGSPYYVAPEVLCKQYGPEVDVWSAGVILYILLSGVPPFWAGNDPNMDCDSLGLALVKLFLLHSPFLLPSETESGIFRQILHGELDFVSEPWPSISESAKDLVKQMLERDPTKRPSAHEVLCHPWIVDDTVAPDKPLDSAVLTRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKDGLKSVGSNLMESEIKSLMDAADIDNNGTIDYGEFLAATLHLNKMEREENLVAAFAYFDKDGSGYITIDELQQASKDFGLGDVHLDEMIKEIDQDNDGRIDYGEFVAMMKKGDVDAIGRSRTMKGNLNFNIADAFGVKESS. | 527 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g07497 | 526 | SMART | serkin_6 | 29 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07497 | 526 | CDD | STKc_CAMK | 28 | 315 | - | - | |
Seca7g07497 | 526 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 395 | 430 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | Gene3D | - | 324 | 499 | - | - | |
Seca7g07497 | 526 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 431 | 466 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | Pfam | EF-hand domain pair | 364 | 424 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | Pfam | EF-hand domain pair | 434 | 495 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | ProSitePatterns | EF-hand calcium-binding domain. | 408 | 420 | IPR018247 | - | |
Seca7g07497 | 526 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 359 | 394 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | FunFam | Calcium-dependent protein kinase 1 | 31 | 114 | - | - | |
Seca7g07497 | 526 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 328 | IPR011009 | - | |
Seca7g07497 | 526 | FunFam | Calcium-dependent protein kinase 1 | 324 | 498 | - | - | |
Seca7g07497 | 526 | ProSitePatterns | EF-hand calcium-binding domain. | 478 | 490 | IPR018247 | - | |
Seca7g07497 | 526 | ProSitePatterns | Protein kinases ATP-binding region signature. | 35 | 58 | IPR017441 | GO:0005524 | |
Seca7g07497 | 526 | FunFam | CDPK-related kinase 3 | 21 | 189 | - | - | |
Seca7g07497 | 526 | ProSiteProfiles | Protein kinase domain profile. | 29 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07497 | 526 | Pfam | Protein kinase domain | 31 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07497 | 526 | ProSitePatterns | EF-hand calcium-binding domain. | 444 | 456 | IPR018247 | - | |
Seca7g07497 | 526 | CDD | EFh | 364 | 423 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | ProSitePatterns | EF-hand calcium-binding domain. | 372 | 384 | IPR018247 | - | |
Seca7g07497 | 526 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 469 | 500 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | SMART | efh_1 | 363 | 391 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | SMART | efh_1 | 435 | 463 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | SMART | efh_1 | 399 | 427 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | SMART | efh_1 | 469 | 497 | IPR002048 | GO:0005509 | |
Seca7g07497 | 526 | SUPERFAMILY | EF-hand | 355 | 495 | IPR011992 | - | |
Seca7g07497 | 526 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 114 | - | - | |
Seca7g07497 | 526 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 149 | 161 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g07497 | 526 | Gene3D | Transferase(Phosphotransferase) domain 1 | 115 | 323 | - | - | |
Seca7g07497 | 526 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 24 | 490 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g07497 | Seca-Chr7 | 178477542 | 178482286 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g07497 | 15 | 522 | EF-hand Containing Proteins | AT1G35670 | 79.528 | 0.0 | 833 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca7g07497 | Pkinase | 6.8e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g07497 | K13412 | - | gmx:547887 | 905.205 |