Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07493 ATGGAATCATGTGTGCCTCCAGGATTTAGATTTCATCCAACAGAAGAGGAACTTGTGGGGTATTACCTCAAGAGGAAGATAAACTCAATGAAAATTGATCTAGATGTTATTGTTGAGATTGATCTCTACAAAATGGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGTCATAAAGATAAGAAGTATCCAACAGGGACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAAGCCGTGACATCCAAAAACAAAATAATAGGAATGAGGAAGACACTTGTCTTCTACAAAGGACGTGCCCCTAATGGAAGGAAAACAGATTGGATTATGCATGAATATAGGCATCAAACCTCAGAACATGGCCCTCCTCAGGCAATAATAAACTTGGTTGTTGCATTAATGCAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTAGAAAGCCTAGTCCAAGTCACAGGCAAGGTTTTGACCCATGGTGTAGCAGTAGTAATCAATTACCACAGGCATATTTCAGAGACCAAAGACCCTTATCAATTACTGATATGCTTCATCCTTCCCCTGAATTGGGTACAAGCAGTCACCCCTTAATTAGCAGCGACTTTCTATCTAACCACCAAAGTACTACTCTTATTATGGATAATAATATTATTCATCACAAACAACAACTCATTCATGACCTTCCACATTTAGCTGATGATACTCCCACTACTCACCTCACAAATGAAGATTGCAGTGATGAAATTAGGAGCAATAACAGTAGTGGACAAGGTGGTGGTATAATTGATTGGAAAAGCTTGGACAATTTGTTTGCTCCACAATTTACTGATGATACATCCAATTACTTTTCACATCCTCCTATGACCATGATGATACCGCATAACCATGAACCTCAAAATCAACCTAATCATCATATGCTAGGTTGCTTTCCTCATTCTTCATAA 996 0.3976 MESCVPPGFRFHPTEEELVGYYLKRKINSMKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVTSKNKIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQAIINLVVALMQEEGWVVCRAFRKPSPSHRQGFDPWCSSSNQLPQAYFRDQRPLSITDMLHPSPELGTSSHPLISSDFLSNHQSTTLIMDNNIIHHKQQLIHDLPHLADDTPTTHLTNEDCSDEIRSNNSSGQGGGIIDWKSLDNLFAPQFTDDTSNYFSHPPMTMMIPHNHEPQNQPNHHMLGCFPHSS. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07493 331 FunFam Nac domain-containing protein 86 14 168 - -
Seca7g07493 331 ProSiteProfiles NAC domain profile. 5 165 IPR003441 GO:0003677|GO:0006355
Seca7g07493 331 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 238 - -
Seca7g07493 331 Gene3D NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Seca7g07493 331 SUPERFAMILY NAC domain 3 165 IPR036093 GO:0003677|GO:0006355
Seca7g07493 331 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07493 Seca-Chr7 178462480 178464879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07493 1 330 NAC Transcription Factor Family AT1G71930 51.841 4.64e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g07493 NAM 3.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07493 - - gmx:100812904 425.246