Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07490 ATGAGTTATTACACCATTGCAGGGATGCTGGGGAAACAGTTGAATTCCCCTCTACTTAGTATTGATTCTGCAGCACAGTTCTGCTATTGTAAGGCTGATCTTGCTGCTGCATCATCAAGTATTTCATTATCAAATATCAGATTTTCTTGTAGATTTTCACCACGTGTAGCAAAAGCAACATGGACCTCAAATCTTTCTACCAAGCATTGGATATTGCATTCAACTGCACAGATAGAAAATATAATCACAAGTGATGAAGATCAGAGTATGTGGGAAGCATGTAAACAAGCTCTTTCTGCATTTAACTTCAGTGATGAAGAAAAAGACAAGATACTTGGAAAAGCATTTGGTCTTGTTCATTCTCCTTATTGGGGAGAGGAACGTAAAAAGGAAGTTCCCAAATTTGAGACAGTAAATGGAACATTAGACTATCTGAGGAGTTTAAATCTTTCTGATGAAGATCTGTCCAAGTTGCTCAAAAAGTTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAGTTGAAAGCTAATATAAAGATCCTGGATGAGCAGTGGGGTATTAAAGGAAAATCACTTAGAAACCTCCTCCTTCGAAATCCAAAAGTTTTGGGTTATAATGTTGATTGTAAAGGAGACTGCATGGCACAATGCACCAGATGCTGGGTTCGTTTCTAG 675 0.3778 MSYYTIAGMLGKQLNSPLLSIDSAAQFCYCKADLAAASSSISLSNIRFSCRFSPRVAKATWTSNLSTKHWILHSTAQIENIITSDEDQSMWEACKQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKKEVPKFETVNGTLDYLRSLNLSDEDLSKLLKKFPEVLGCNLEEELKANIKILDEQWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07490 224 FunFam uncharacterized protein LOC106769908 74 220 - -
Seca7g07490 224 Pfam mTERF 142 206 IPR003690 GO:0003690|GO:0006355
Seca7g07490 224 Gene3D Transcription termination factor 3, mitochondrial 38 220 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07490 Seca-Chr7 178428137 178431209 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca7g07490 mTERF 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07490 - - gmx:100797265 379.407