Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07488 ATGGGGGATTCCTATGTCACCAAGGACCACCTATTTGGTACTTCCTCTGAACAAACAGAGGATGGTGCTTGCTTATCAGCAATGCTACTGAGTACTAATTTGGTGTATCCTGCAGTTGTGAATGCTGCTATTGAACTCAATTTGTTTGAGATCATAGCAAAGGCAACCCCACCAGGTGCTTACATGTCATCCTCTGAAATTGCTTCTAAGATGCCAACTCACCACTCTGACTTGTCTAATAGGCTTGATCGCATGCTGCGTTTGCTTGCTAGTTACAACATTCTCACTTGTTCCACTCGCACCACTGAAAAGGTTTATGGCCTATCACAAGTTGGAAAATACTTAGTCCCTGATGAGAGTAAGGGCTACTTGGCTTCATTTGTAACATTCCTCTGTTATCCAGCACTCTTACAAGTTTGGTTGAACTTCAAAGAAGCAGTGATTGATGAAGACATTGACCTGTTTAAGAAACTTCATGGAATAACCAAGTACCAGTACATGGAAAAGGATCCAAAAATGAACCATATTTTTAACAAGGCTATGGCTGATGTGTGTGCAACAGAGATAAAAAGAATACTTGAAATTTATACTGGATTTGAGGGAATATCAACATTGGTTGATGTAGGAGGTGGAAATGGACAGAATCTTAAAATGATAATCTCTAAGTACCCTTCAATAAAGGGAATTAATTTTGATCTCCCCCAAGTCATTGAAAATGCATCACCAATTCCAGGGATTGAACATGTTGGAGGAGATATGTTTGCAAGTGTTCCAAAGGGTGACGCCATAATACTAAAGGCTGTATGTCATAATTGGTCAGATGAAAAATGCTTAGAATTTTTAAGCAATTGTCACAAGGCTTTGTCACCAAATGGGAAGGTGATTGTTGTGGAGTTCATATTGCCTGAAGAGCCAGAACCAACTGAAGCATCTCAGCTTGTTTCCACTCTTGACAACCTCATGTTTATCACAGTTGGTGGAAGGGAAAGAACTCAGAAACAATATGAGAATTTGTGCATGCTCTCTGGATTTTCTAAATTTCGTGTTGCTTGCCGTGCTTTCTCTAGCTTGGGGGTGATGGAATTTTGCAAATGA 1095 0.4 MGDSYVTKDHLFGTSSEQTEDGACLSAMLLSTNLVYPAVVNAAIELNLFEIIAKATPPGAYMSSSEIASKMPTHHSDLSNRLDRMLRLLASYNILTCSTRTTEKVYGLSQVGKYLVPDESKGYLASFVTFLCYPALLQVWLNFKEAVIDEDIDLFKKLHGITKYQYMEKDPKMNHIFNKAMADVCATEIKRILEIYTGFEGISTLVDVGGGNGQNLKMIISKYPSIKGINFDLPQVIENASPIPGIEHVGGDMFASVPKGDAIILKAVCHNWSDEKCLEFLSNCHKALSPNGKVIVVEFILPEEPEPTEASQLVSTLDNLMFITVGGRERTQKQYENLCMLSGFSKFRVACRAFSSLGVMEFCK. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07488 364 PIRSF O-mtase 6 364 IPR016461 GO:0008168
Seca7g07488 364 SUPERFAMILY "Winged helix" DNA-binding domain 21 119 IPR036390 -
Seca7g07488 364 Gene3D Vaccinia Virus protein VP39 116 364 IPR029063 -
Seca7g07488 364 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Seca7g07488 364 PANTHER O-METHYLTRANSFERASE 27 347 IPR016461 GO:0008168
Seca7g07488 364 FunFam Caffeic acid O-methyltransferase 118 364 - -
Seca7g07488 364 CDD AdoMet_MTases 204 301 - -
Seca7g07488 364 FunFam Caffeic acid 3-O-methyltransferase 7 115 - -
Seca7g07488 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 354 IPR029063 -
Seca7g07488 364 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Seca7g07488 364 Gene3D - 5 115 IPR036388 -
Seca7g07488 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 364 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07488 Seca-Chr7 178411167 178412975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07488 14 354 Monolignol Biosynthesis Gene Families AT5G54160 47.550 4.35e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07488 - - gmx:100787536 633.639