Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07481 ATGAACATGGGCAGGTATGAGTACACAACCTCTTTCCTACGTACTTTACTCTTCTTTGGGTTCTGTCCTTTGGTTTTGTCTCTGCTGTCTCAATACCAAACAAACACCATGATCAATCTCTCCCAACTTGTTAATGTCCCTGATTGGAATAGCACCAGAGACCCCAATCCATGTTCATGGAAAGGGGTAAGTTGTGACCGTAGCAACTCATCTGTGATCAAGATTATCCTATCTGGGCATTCTCTCTCTTCTCCAGAATTTGTCCCTGTTGTTTGCAAGATTGAAACTTTGCAGCACCTTGATGTCTCAAACAACCGTCTCAGCTCTATCCCAGATGAGTTCATTGCTGAATGTGGAAAGATTGAGCATATAAAGCTGCTGAATTTCAGTGGAAATGTGTTAAATGGTGCTTTGCCTATTTTTCATGGTTTTGATGGATTGGAATCCCTGGATATGTCTTTCAATGCCTTGAACGAGAGTATTGGTTTACAGCTAGATGGATTGGCTAGCCTCAAGATTTTGAATCTCAGTAACAATAGCTTCACTGGGAATCTTCCTACCAACCTGGGAAGGTCTATGGTCTTGGAGCAGCTTCTGCTTTCATCGAATCATTTTTCAGGAACAATCCCAGATCAAATTTTGAGCTATAAAAATTTGACTGTGATTGATCTTAAGGAAAATGTTCTTGTTGGGTCTATCCCTACCAATATTGGAAATCTATCCAAATTGGAAAATTTGACTCTTTCCTCTAATAGACTCGATGGGAACATCCCAATAACACTCTTGAACATCACAACCCTTGCAAGATTCGCTGCAAATCAAAACAATTTCACTGGTGACATTCCTCATGGAATTACAAAATTTCTCAAAAATTTGGATCTTAGTTATAATAATTTAGTTGGGTCCATTCCAGAAGACCTTTTATCTCCATCACAGCTCCAGGCTGTAGACTTGTCCTATAACAAGTTACATGGGGTTTTACCTGCAAATATTTCTCCTAATTTAGTGAGGTTGAGATTAGGGGGAAATATGCTGAATGGAGCGGTTCCTTCAGGTACTTGTACAACCGTTCAAGCTTTGACGTACATGGAGCTGGAAAACAATGAATTGACAGGTTTGATACCTCCTGAATTGGGTTCTTGCCAGAAACTGGCTTTATTGAATTTGGCTGGGAACCAATTGACTGGGGCATTGCCTCCAGAACTTGGCAACCTTAGCAATCTTCAAGTCTTGAAGCTTCAAATGAACAAGCTTAATGGGACCATCCCAATTCAAATTACACAACTACATAAGTTGTCTACCCTGAATTTGAGCCGGAATTCTCTGGATGGATCAATTCCATCTGAAATGTCAAGCTTGACAAGCCTTGTATTCCTGCACTTGCAAGAAAACAAGCTCAGCGGTTCTATACCCTCATCCATTAACAACTTGAGATTTCTTATAGAAGTCCAACTTGGGGAAAACCAGCTAAGTGGTAACATTCCACAGATGCCACTGAGTCTACAGATTGCCTTGAATCTCAGTAGTAACCACTTCAGTGGAACTATTCCTAGCAGTTTTGGTGATTTGACTAGCCTAGAAGTTTTGGATCTCTCAAACAACAACTTTTCTGGCGAAATTCCTCAGTCTCTGACTAAAATGGCAGCATTGACACAGTTACAACTTTCAAACAATCATCTGTCAGGTTTCATTCCAACATTTGGTCCTTATGTTAAAATCGATACAACAGGAAATAATGTCATGAACAATACTAATGCCCCATCCAATAGTTCTCCAACATCAGCAAAGAAAGGGAAATCTGTTATTGTGGCTGTTCTTGTTGCAATTGCTGCTGCTATTTTTCTGGTTGGCCTGATCTCTCTGCTGGTTGTATCAATCTCTCGACACTATTGCAGGGTGAATGATGAGCACTTACACTCAGGGGAAGGTGAAAATGTTCAACTTCCTCAGGTCATCCAAAGTAATTTGTTAACTCCAAATGGGATCCATAGATCAAACATTGACTTCTCCAAGGCAATGGAAGCTGTTGCTGAAACATCAAACATTACTCTGAAAACTAGGTTTTCAACTTATTATAAGGCCATAATGCCATCTGGATCAGTCTATTCTGTCAAGAAGCTTAACTGGAGTGACAAGATATTCCCAGTGAGTAGTGTTGATAAATTTGGGAGAGAGCTAGATGTCTTGGCAAAGCTGAACAATTCAAATGTCATGACTCCTCTAGCCTATATTCTGTCCACTGACAGTGCTTATATATTATATGAGTTTGTCTCAAATGGCTCTCTTTTTGATGTGCTTCATGGAAGCATGGGAAACTCTTTAGATTGGGCAAGCAGATATAGTATAGCTGTTGGGGTGGCTCAGGGTCTCTCTTTTCTGCATGGATTTTCCTCTGGTCCAATACTTCTCCTTGACTTATCAAGTAAAAGTATTATGCTGAAATCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTATAGGGTGATTGATCCCTCCAAGAGTACAGGGAGCTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACAATGGCAGGGAATGTCTATAGCTTTGGGGTCATTCTACTCGAATTGCTGACAGGCAAACCTGCAGTGACTGAAGGAACTGAATTGGTCAAATGGGTTTTGCGTAATTCAAGAAATCAAGATTACATTCTTGATTTTAATGCTAGTAGAGCATCACAGGCTGTCAGAAATCAAATGCTTGCAATTCTGAAGATTGCTTTTGATTGTGTAAGCACGTCCCCTGAGACAAGACCAAAGATGAAGACTGTGCTACGGATGTTGCTAAATGCTAGATAA 2853 0.4048 MNMGRYEYTTSFLRTLLFFGFCPLVLSLLSQYQTNTMINLSQLVNVPDWNSTRDPNPCSWKGVSCDRSNSSVIKIILSGHSLSSPEFVPVVCKIETLQHLDVSNNRLSSIPDEFIAECGKIEHIKLLNFSGNVLNGALPIFHGFDGLESLDMSFNALNESIGLQLDGLASLKILNLSNNSFTGNLPTNLGRSMVLEQLLLSSNHFSGTIPDQILSYKNLTVIDLKENVLVGSIPTNIGNLSKLENLTLSSNRLDGNIPITLLNITTLARFAANQNNFTGDIPHGITKFLKNLDLSYNNLVGSIPEDLLSPSQLQAVDLSYNKLHGVLPANISPNLVRLRLGGNMLNGAVPSGTCTTVQALTYMELENNELTGLIPPELGSCQKLALLNLAGNQLTGALPPELGNLSNLQVLKLQMNKLNGTIPIQITQLHKLSTLNLSRNSLDGSIPSEMSSLTSLVFLHLQENKLSGSIPSSINNLRFLIEVQLGENQLSGNIPQMPLSLQIALNLSSNHFSGTIPSSFGDLTSLEVLDLSNNNFSGEIPQSLTKMAALTQLQLSNNHLSGFIPTFGPYVKIDTTGNNVMNNTNAPSNSSPTSAKKGKSVIVAVLVAIAAAIFLVGLISLLVVSISRHYCRVNDEHLHSGEGENVQLPQVIQSNLLTPNGIHRSNIDFSKAMEAVAETSNITLKTRFSTYYKAIMPSGSVYSVKKLNWSDKIFPVSSVDKFGRELDVLAKLNNSNVMTPLAYILSTDSAYILYEFVSNGSLFDVLHGSMGNSLDWASRYSIAVGVAQGLSFLHGFSSGPILLLDLSSKSIMLKSLKEPLVGDIEHYRVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRNSRNQDYILDFNASRASQAVRNQMLAILKIAFDCVSTSPETRPKMKTVLRMLLNAR. 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07481 950 Pfam Leucine Rich Repeat 97 115 IPR001611 GO:0005515
Seca7g07481 950 Pfam Leucine rich repeat 505 560 IPR001611 GO:0005515
Seca7g07481 950 Pfam Leucine rich repeat 406 466 IPR001611 GO:0005515
Seca7g07481 950 Pfam Leucine rich repeat N-terminal domain 47 66 IPR013210 -
Seca7g07481 950 SUPERFAMILY RNI-like 257 562 - -
Seca7g07481 950 SMART LRR_bac_2 310 330 - -
Seca7g07481 950 SMART LRR_bac_2 168 188 - -
Seca7g07481 950 SMART LRR_bac_2 357 378 - -
Seca7g07481 950 SMART LRR_bac_2 94 113 - -
Seca7g07481 950 SUPERFAMILY Protein kinase-like (PK-like) 688 946 IPR011009 -
Seca7g07481 950 ProSiteProfiles Protein kinase domain profile. 677 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07481 950 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 273 947 - -
Seca7g07481 950 Gene3D Phosphorylase Kinase; domain 1 653 756 - -
Seca7g07481 950 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 329 594 - -
Seca7g07481 950 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Seca7g07481 950 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Seca7g07481 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 645 756 - -
Seca7g07481 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 281 - -
Seca7g07481 950 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Seca7g07481 950 FunFam leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 757 950 - -
Seca7g07481 950 PRINTS Leucine-rich repeat signature 97 110 - -
Seca7g07481 950 PRINTS Leucine-rich repeat signature 523 536 - -
Seca7g07481 950 Gene3D Transferase(Phosphotransferase) domain 1 757 950 - -
Seca7g07481 950 SMART LRR_typ_2 523 546 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 547 569 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 240 264 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 168 192 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 94 117 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 453 477 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 405 429 IPR003591 -
Seca7g07481 950 SMART LRR_typ_2 357 381 IPR003591 -
Seca7g07481 950 Gene3D Ribonuclease Inhibitor 289 593 IPR032675 -
Seca7g07481 950 SUPERFAMILY L domain-like 43 349 - -
Seca7g07481 950 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 31 187 - -
Seca7g07481 950 Pfam Protein kinase domain 688 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07481 Seca-Chr7 178313955 178317347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07481 147 950 Receptor kinase-like Gene Family AT2G41820 38.288 8.32e-156 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g07481 Pkinase 2.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07481 - - gmx:100796647 1271.91