Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07476 ATGGAAGATTCAGAGGAAGATGAGCTTCTGAATCTTAGCCTTTCAGTTGCTGCTGATAGAGAAAGGAAAAAAAAGGGAAAAAATGTTTCCATGAGTAGTAGTAGTAGTAATGCTAGGAATAAGTCTTCCTCCTATGAAGGCTATGAAGGGAAGATCTTTAGGCTTCTCCAAATGAGGGAGCAGATGCTAAGACAAGACCACAGATCAAGGAAAGGAGTTGTTGAAGATGGAAATGGCCTTCCTTTAATCCACTTGTTACTCACAACTTCCACTTGTGTTGATGAGAACAACTTTGATTCTTCCTTAGAGAATCTCACTGATTTATACCAAACTGTTTCCCTAACAGGTGATTCAGTCCAACGTGTTGTTGCTTATTTTGCTGATGGTTTGGCTGCTAGGCTTCTCACTAAGAAATCCCCTTTCTATGACATGATCATGGAAGAACCAACCATTGAAGAAGAGTTTCTTGCTTTCACAGATCTCTACAGAGTCTCCCCTTACTTTCAATTTGCTCATTTCACTGCAAACCAAGCTATTTTGGAGGCTTTTGAGATGGAAGAAGAGAGGAACAACCGTTCTCTTCATGTCATTGACTTTGATGTCTCTTATGGCTTCCAATGGCCTTCTCTCATTCAATCTCTCTCAGAGAAAGCCACCACTGGAAACAGAATCTCCCTCAGAATAACAGGGTTTGGGAAGAGCCTTAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGATTTGGAAATCTTGTGTTTGAATTCCAAGGTTTGTTAAGAGGCTCAAGGGTTATTAACTTAAGGAAGAAAAAGAATGAGACTGTGGCAGTTAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTTATGAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAATCCATCCATTGTTGTGTTGGTGGAGCAAGAAGGAAGTAGGAGTCCTAGAAGCTTCTTGTCAAGATTCACAGACTCTTTGCATTATTTTGCAGCCATGTTTGATTCATTGGATGATTGTCTACCACTTGAGAGCACTGAGAGGTTGAGAATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAAAGCATGCTTAATCATGATCATGTGGATGTGGATTGTCCTAAATATGAGAGGATGGAAACATGGAAAGCAAGGATGGAGAATCATGGGTTTGTTGGAACTAAAATAAGCTCAAAGTCTATAATACAAGCAAAATTGCTTCTCAAGATGAGGACTCATTATTGTCCACTTCAATTTGAAGAAGAAGGAGGTGGTGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTCCTTACAGTTTCAGCATGGCAACCAGTATGA 1389 0.3974 MEDSEEDELLNLSLSVAADRERKKKGKNVSMSSSSSNARNKSSSYEGYEGKIFRLLQMREQMLRQDHRSRKGVVEDGNGLPLIHLLLTTSTCVDENNFDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTKKSPFYDMIMEEPTIEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEMEEERNNRSLHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKSLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNHDHVDVDCPKYERMETWKARMENHGFVGTKISSKSIIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQPV. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07476 462 ProSiteProfiles GRAS family profile. 73 460 IPR005202 -
Seca7g07476 462 MobiDBLite consensus disorder prediction 29 44 - -
Seca7g07476 462 MobiDBLite consensus disorder prediction 20 44 - -
Seca7g07476 462 Pfam GRAS domain family 82 460 IPR005202 -
Seca7g07476 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07476 Seca-Chr7 178274971 178276359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07476 92 461 GRAS Transcription Factor Family AT3G54220 34.293 6.61e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca7g07476 GRAS 2.2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07476 - - gmx:100809458 791.186