Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07466 ATGGGAGAGAGGTTGCTAAAAAGGGTGAGAGAATTTTTGCTAGAAAAGGTGCTACCTTTTGAGGTAGGATGGTTTGACCAAGAGGAGAACACAAGTGCAGCAATTTGTGCACGTTTGGAAACTGAAGCCAACTTGGTTAGATCCCTAGATGCAGAAAGAATTTCATTGTTAGTTCAGATTTCTGTCACAGCTACACTAGTTTTTGTACTTGGTTTAATTGTTTCATGGAGGGTGACTATTGTCATGATTGGTATGCAGCCTTTGATCATTGCATGTTTATACTCAAAAAGCATTCTCATGAAAAGTATGTCAAGCAAAGCAAGAAGTGCTCAAAGAGAGGGTAGTCAATTAGCAATGGAAGCTACTATTAACCATAGGACTATAACTGCATTCTCATCTGAGAAAAGGATGCTAAATCTGTTCACAACTGCTATGGAGGGCCCCAAGAAGGAAAGCATCAAGCAATCATGGATTTCAGGTTCCATATTGTCAGTGTCACAATTTATAACAACATATATAACTTTGACTTTTTGGTATGGTGGCAGGTTATTGAATCAAGGGTTAGTGGAATCAAAACACCTTTTGCAAGTTTTCCTCATTTTGATGGGAACTGGTAAGCAAATTGCAGATACAGGAAGCATGACATCTGACATAGCTAAAAGTGGAAGAGCTATGAATTCAGTATTTGCAATACTTGATAGGAAAAGTAAAACACCTTTTGTAATACAGGTTTTCCTATCTACCCCCTTTTCCTCATGGCTCTCTTTCTCTTTACTATTTTAA 783 0.3793 MGERLLKRVREFLLEKVLPFEVGWFDQEENTSAAICARLETEANLVRSLDAERISLLVQISVTATLVFVLGLIVSWRVTIVMIGMQPLIIACLYSKSILMKSMSSKARSAQREGSQLAMEATINHRTITAFSSEKRMLNLFTTAMEGPKKESIKQSWISGSILSVSQFITTYITLTFWYGGRLLNQGLVESKHLLQVFLILMGTGKQIADTGSMTSDIAKSGRAMNSVFAILDRKSKTPFVIQVFLSTPFSSWLSFSLLF. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07466 260 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 238 IPR039421 -
Seca7g07466 260 Pfam ABC transporter transmembrane region 1 200 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g07466 260 SUPERFAMILY ABC transporter transmembrane region 1 234 IPR036640 GO:0005524|GO:0016020
Seca7g07466 260 Gene3D ABC transporter type 1, transmembrane domain 1 239 IPR036640 GO:0005524|GO:0016020
Seca7g07466 260 CDD ABC_6TM_Pgp_ABCB1_D2_like 1 237 - -
Seca7g07466 260 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07466 Seca-Chr7 178141842 178142624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07466 1 237 Calmodulin-binding Proteins AT2G36910 38.235 2.65e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07466 K05658 - gmx:100804664 357.836