Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07463 ATGGAACACAAAGTGAAAACAACACCAATAACTCTAACTCCTCCTCCACCACCACCACTCCCAATTCATGTTCCCGCCATGCTTTCTAACTCTCCTCCATCTTCATCTTCTTCTCCTCCTTCACAATCTCCAACACCTTTCCATTCACCCTCTCAACCACCATCTCCTCAACCACCACCAGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGCAGGTGTGTGGAGAAATGTGTCTTGGCTCCCTATTTCCCTCCTACTGATCCACTCAAGTTCACCATTGCCCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGTAGAATTGCCAGAATCTCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAAGCAAATGCTAGGATCAGAGACCCAGTTTATGGTTGTGCAGGTGCAATATGCCAACTCCAAAAGCAAGTTAGTGAGCTACAAGGACAGCTGGCCAAAGCACAAGCTGAGTTAGTCAACATGCAGTGCCAACAAGCTAATTTAGTGGCACTAATTTGCATGGAAATGAGTCAATCACAAGATCAGCACATGCTTCAGCCTCAACAACCTCATGTTGATATGAGCTGCTTCCTAGAGGATAACAGTAGTTTTGGCTCTGCTTGGGAGCCTCTTTGGACATGA 666 0.473 MEHKVKTTPITLTPPPPPPLPIHVPAMLSNSPPSSSSSPPSQSPTPFHSPSQPPSPQPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQVELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMQCQQANLVALICMEMSQSQDQHMLQPQQPHVDMSCFLEDNSSFGSAWEPLWT. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07463 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 64 192 - -
Seca7g07463 221 Pfam Lateral organ boundaries (LOB) domain 65 163 IPR004883 -
Seca7g07463 221 MobiDBLite consensus disorder prediction 1 59 - -
Seca7g07463 221 MobiDBLite consensus disorder prediction 10 26 - -
Seca7g07463 221 MobiDBLite consensus disorder prediction 37 59 - -
Seca7g07463 221 Coils Coil 145 172 - -
Seca7g07463 221 ProSiteProfiles LOB domain profile. 64 166 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07463 Seca-Chr7 178099302 178100996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07463 61 221 AS2 family AT1G07900 70.303 3.83e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca7g07463 LOB 2.1e-39 No_clan