Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07459 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCCGTGAAGAAAGTTTTCATTTCTGAATCCAAAAAAGATCAGAAACAGAAACAATATAAGTCAAAGTTAACATGTTTTGGATATCATCATCATAATGAGGATCCTGAAGGAGCAGCAATTGCTGTTGTTCCCTCCCTTCCACCAAGAAAAGACATCAAACCAAAAACTGAGGCAGAGAATGAACAGAACAAACAAGCATTTTCATTGGTTTTAGCCACAGCTGTTGCAGCCGGGGCTGCAGTTGCTGCTGCTCAGGCTGCTGCAGAGGTTGCTCGTCTCACAAGTATGCCACATTACCCTGGAAAAACCAATGAAGAAATAGCAGTTATCAAGATTCAAACTGCATTCCGTGGATATTTGGCAAAGAGATCATTGCGTAGCTTGAGAAGTTTGGCAAGGTTGAAAACATTGGTACAAGGGCAATCTGTTCAACGGCAAGCAGCTACCACATTACAATGCATGCAAACTCTTTCAAGATTGCAGACTCAGGTTCGTGCCCGGAAGATCAGAGTTTCTGAGGAGAACCAATCTCTTCAGCGGCAATTGCAGCAGAAACGTGAAAAGGAACTTGAGAAGTCTCATTTGCAGCTGGTTGGAGAAAAATGGAATGATAGCTCAAAATCAAAGGAGCAAATTGAAGCAAAATTGTTGCACAGACAAGTAGCTGCTATGAGAAGAGAGAAGGCTTTGGCCTATGCTTCAACACATCAGCAAACATGGAGGAACTCACCAAAATCTACAAATGCCACATTTATGGATCCAAACAATCCTCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGCAAGACCATGGGAGGGCCAAAACACTATGTATCAAAATGATCATGCATCTGCAAAGAATGCTTCAAGCCACACCATGTCAGTTGGTGAAATCACCAAATTGTATTCTCTCCGTGATCAAAATAATGTTGATGGTAAAAATTCATCAACAAGCCAAAAAGCTAGTCATCCTAGGAGTCACAATTCCCCTTCATCTCTATCTTCAAGGACCTCCCCATCTGCTAATAATGCAAAAGCAAAGGCATCAAGTCCAAAGGGTAGTTCCTCTTGGGGTGGTGATGGTGACTCTAGAAACATATTAAGCAAAAACTCAGAAAGCAACCGCAGGCATAGCATTGCTATCTCACCAATAAGAGATGATGAAAGCCTTGCAAACTCACCTGCTTTTACAAATCACACAACATCCACAAAGGTTGCAAAGGCAAGGTCTAAAGTGCAAAGTGTACATAAAAATGGAACACAAGAAAAAGGAAGTGTTGTTTCTGCAAAGAAGAGGCTTTCTTGCCCAGCTTCTCCAGCCAGTCCAAGAAGGCATTCTGTTCTTCCAACAAAGGTGGGAATGGTTTCTAATAAGAATGTTGCCACCATTTCTGAAGGGAAAGTGAAGGTGAAGAATGGAGGGAGCAGGTAG 1464 0.4255 MGRKGSWFSSVKKVFISESKKDQKQKQYKSKLTCFGYHHHNEDPEGAAIAVVPSLPPRKDIKPKTEAENEQNKQAFSLVLATAVAAGAAVAAAQAAAEVARLTSMPHYPGKTNEEIAVIKIQTAFRGYLAKRSLRSLRSLARLKTLVQGQSVQRQAATTLQCMQTLSRLQTQVRARKIRVSEENQSLQRQLQQKREKELEKSHLQLVGEKWNDSSKSKEQIEAKLLHRQVAAMRREKALAYASTHQQTWRNSPKSTNATFMDPNNPHWGWNWLERWMAARPWEGQNTMYQNDHASAKNASSHTMSVGEITKLYSLRDQNNVDGKNSSTSQKASHPRSHNSPSSLSSRTSPSANNAKAKASSPKGSSSWGGDGDSRNILSKNSESNRRHSIAISPIRDDESLANSPAFTNHTTSTKVAKARSKVQSVHKNGTQEKGSVVSAKKRLSCPASPASPRRHSVLPTKVGMVSNKNVATISEGKVKVKNGGSR. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07459 487 PANTHER IQ-DOMAIN 5-RELATED 1 449 - -
Seca7g07459 487 Coils Coil 177 200 - -
Seca7g07459 487 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Seca7g07459 487 MobiDBLite consensus disorder prediction 317 457 - -
Seca7g07459 487 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Seca7g07459 487 MobiDBLite consensus disorder prediction 243 262 - -
Seca7g07459 487 SMART iq_5 113 135 IPR000048 GO:0005515
Seca7g07459 487 MobiDBLite consensus disorder prediction 317 389 - -
Seca7g07459 487 MobiDBLite consensus disorder prediction 402 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07459 Seca-Chr7 178058098 178062397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07459 1 484 IQD Protein Family AT5G03040 43.699 2.82e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07459 - - gmx:100807307 552.362