Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07453 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAAGAGAGGAAGCACGAGAGGTCGGAATCGCTTGGGTCCGTGGCGAGATGGAGAGATTCGTCTCATCACCGAGACTTCAATCGGTGGGGGTCAGCCGAGTTCCGCAGACCGCCAGGTCATGGTAAACAGGGTGGTTGGCACCTGTTTTCCGAAGAATCTGGTCATGGGTATGCAGTTTCTCGGTCCAGTGACAAGATGCTGGAGGAAGATAGTCGGCCATCGATCTCACGGGGGGATGGAAAATATGGCAGGAGCAGTAGGGAAAATAGAGGTCCCTTTGGCCAGAGAGATTGGAGAGGCCATTCATGGGAAACCGCCAATGGCTCTCTAAATTTGTCCAGGAGGCCATCGGATGTGAATAATGACCAGAGGTCACTTGATGATGCCCTAACATATTCCTCTCATCCTCATTCTGATTTTGTAAACACTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGCGGTGTCAATGGGTTGGGAACAGGCCCAAGAAGTGATAGAGAGAATTCTCTGGGTTCAATTGACTGGAAGCCACTTAAATGGACCCGTTCTGGCAGCTTGTCTTCCCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGTTTGGGTGGAGCAGATTCATATGAAGCAAAGGCTGAGTTGCAACCCAAAAATGCAACTGCTAATGAGACACATTCAGGGGAAGCTGCTGCATGTGTGACATCTTCTGCGCCATCTGAAGATACAACTTCCAGAAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTTGAGGGACCTGATATAGGTTCAAACAAAGATGGCCCTGTGTTGTCTACTAGTAATATGGAACCTTGTAATTTCCTCACTTCTAACTTAGCAGATAAAAGCCCAAAAGTTACAGGATTTTCAGATTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGAACCTAACTTCAACCTTGTAGCAGGTGTGGATGATAAATTATTTGGAAAGACTGCAAATGTGGAAAATGATGTTTGTAATTTGGCTGGTTCACCTGCTCCTGTGTCTCAAAATCATCTGCAGACATTTTCTTTTAACTTAGATAAATTGGATATTGACTCCTTGAATAATTTGGGCACTTCAATAAATGAATTAGTACAATCTGATGATCCAAGTTCTGTTGATTCTGGTCTAGTGAGGCCCAATGCAATTAATAAGTTGCTGATATTGAAAGCTGACATTTCTAAGGTATTGGAGACGACTGAATCTGAAATTGATATGCTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGATAGACGTCCATGTCCAGCAGCATTGTGCTCCCAGCTGGAAGGTATAAATGAAAAATCATATGAAGAACTTGTTGGAGTCTCTCATAAGGTCACTCGGCTAGTGCCTTTGAAAATTGTTTCTTCTGATGAACCCAATGTAGAGAAGATGCATCAGTCAACTAATTTAGATAGTATTCATGAAAATGGCAAGGAAGAAGATATTGATAGTCCTGGAACAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGATTAAAGCAGTTTCTTCATGTTATACTGGGGGATATGGTAACTTCTCTGCGGACTTGGATGCTGTTCAGTCTACAGACATAAAATCCTTAGTCCCCTGTACTAGTAGGAAAGTTGCTATCATATCTACTGGTGGTGATGGCAATACATCTATGGAGGTAAAGGATAGCATGGATGCTGCCACTGGAGCAAGCTTATGTTCTAGCTATGAGGATACTTATAATACAATTATTTCTTCCAATAAAGAAACTGCGGACAGAGCGCATGGAGTATTTGCTAAGTTATTGCCCAAAGAATGTTGTAAGATTGATGATATGGGAGCCATCAGTGACTCGTGCTCTGATACATTGATTTTGGAAAAATTTGCAGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATCACACTTAAGTTCAAAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATTAGGAAATGCCGCCCAAAATCATCTCACAAGAAAAATGAACTAAGTGTGCGAACTACCTGTAATGGTAATCAGAAGAATCGATCCTCCATTCGTTCACGTTTTCCTTTCCCTGCAGGAAATCATCTAAGCTTGGTTCCAACATCAGAAATAATTAATTTTACAAGCAAATTGCTCTCAGAATCCCAATTTAAAGTTCAGAGAGACGCCCTGAAGATGCCGCCATTAATTTTGGATGAAAAGGAGAAGGTGACTTCAAAATTCATATCTAGTAATGGGCTGGTTGAAGACCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCTGAAGAGAGGGAAATTTTCTTGGAGAAGTTTGCTGCCTTTGGAAAAGATTTTAGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAGAATCATAAATCTGATTGTTTTGAGAAACTGAAGAAGCAAGGTGTCGGTAAGCTACGGAAGGCGTTTTCAGCTAAAACTGACTTGGTGGTGTCTGGTAAGAAATGGAATCGTGAAGTGAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATGGCAGATGGCATTGCAGGTAATAAAAAAATGCGTTCAGGAGGTTTCCTTTTGGGGGGATATGGGAATGTGAAAACATCAAGGGGTGAAGACAGCATCATGGAGAGATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATCACAAGTTCGGTTGATCCTGTAGAGGGTCACAAGGATAGGAAGTTCCTGAAAGTGAGCCCTTTATGCAAACAACCCTTGACACCTGATGTTACTCAGAATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTTCTGATTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGCAAGGATTTCACAAAGATAGCACGGTGTGTAGGAACAAGGACCCAAGAACAGTGCAAAGTTTTCTTCAGCAAGGCTCGCAAATGCCTTGGATTGGATCTCGTGCACTCCATTCCTGGAAATGTTGGGTCCCCAGTGAATGATGATGGAAATGGTGGTGGGAGTGACTCAGATGAAGCATGTGTTGTTGAGACAGGTTCTGTGGTTGGCACTGATAAGTCTGGCACTAAAACAGATGAGGATCTGAACACATACCATGATGAATCCAATCCTGTGGAAGGTAGGAACCTGTCATCTGAATTAAATGAATCAAAGGAAGTTAATGGGACAGTAGATCTTGAAGATGTAAATATGGTGTCTGGTGCTTGCGCAATTAAGGTTGAATCTAAACTGGGCTCTGATGTCAGTGAAGCTGTCTCGTGTAGTCCTGATAAGTCTGGTTCAATCAGTGGACAAGCAGCTATAGTTGTGTCAGATAGCATAGAAGTTGGAAAAGATAAAGCGAAGAAATTGGGAGGTGCAGGTACTGAAGTGTTTTCTGCTCCAGGGACAATTGAGTCACACAAGTGTACTTCTGTTGCTGTGGATACACTGGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAAATGAATTGGAGAGGCAAAGAGTGTCATCACCTCAATGTCTTGACAGAGATGATAAACATGAAGCTGATACAGGTGTTGTAGTTGAATTGAAAAGCTCTGTGCAAGATTCAAGTACTACAGTAAATGCTTCACTCTCATCTGTGGGCAATTCTTCAGGATTGAGTTTTGATACTGAAAATAAGCATGTGTCCCTTGGGAAGCCTCATATCTCTGCATCGTCTGTGACTGTGAACGAACTTCATACCACTGCAAATTCACTGTTGCAAAATGCTGCTGCTGCTGATGTTCAGTGTGAGAAGACAGGCAGCCAAGATCGACAGTCCTCTACTTGTGATATCCAGGGAAGTAGAGATATGCGTTGTCATAACTCCATTAGCAATGGTGACCATCAGCTTCCTATTCCTGGGAACCAAGTTGAGGCTGCTAGCATCCTCCAGGGCTATCCCTTGCAAGTGCCAATTAAGAAAGAAGTGAATGGAGATATGAATTGCAGCAGTTCAGCAGCTGAGTTGCCTCTTATGTCCCCAAAGACTGAACAGACCGATGATCATTTCAAAACAATGTTACGGCATTCCTCAGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTATTTGGGAAGATATTAACTAATCCTTCATCCACTCAGAAACCTAATTTGACTAAGGGAAGTGAAGAAAATGGTACCCATCATCCCAAGAATAGCAACAAGGCTTCTAGTTTGAAATATACTAGCCATCATAACAACACTGATGGAAATTTGAAAATTTTGAAGTTTGACCGTAATGACCGTAATGATTATCTCGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTTTTGGGATGGGAACAGAATACAGACTGGTCTCTCATCATTGCCTGATTCTGCCATCTTGCTAGCAAAATATCCTGCTGCCTTCAGTAATTATCCTACATCTTCTGCCAAATTGGAGCAACAGTCATTGCAGGCATTTGCCAAGAATAATGAAAGGCACCTGCATGGTGCATCCGCATTTTCAACTAGAGACATCAATGGCAGCAATCCTGTGATTGATTATCAGATGTTTAGAAGTAGGGATAGTCCTAAAGTGCAGCCATTTGTGGTAGATGTCAAGCACTGCCAAGATGTATTCTCTGAGATGAATAGAAGAAATGGTTTTGAAGCAATCTCTGGTTTGCAGCAGCAGGGAAGAGGAATGATGGGAATGAACAGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCATGCAGTGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCACTATTCTAATGCTGACAAGTATGGTGGTCAGACCGGGAGCATTGCAAGAGAGGATGAACCATGGGGAGGGAAGGGGGAAGTAGGAAGGTAG 5127 0.4291 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAVSRSSDKMLEEDSRPSISRGDGKYGRSSRENRGPFGQRDWRGHSWETANGSLNLSRRPSDVNNDQRSLDDALTYSSHPHSDFVNTWDQHHLKDQHDKMGGVNGLGTGPRSDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSLGGADSYEAKAELQPKNATANETHSGEAAACVTSSAPSEDTTSRKKPRLNWGEGLAKYEKKKVEGPDIGSNKDGPVLSTSNMEPCNFLTSNLADKSPKVTGFSDCASPATPSSVACSSSPEPNFNLVAGVDDKLFGKTANVENDVCNLAGSPAPVSQNHLQTFSFNLDKLDIDSLNNLGTSINELVQSDDPSSVDSGLVRPNAINKLLILKADISKVLETTESEIDMLENELKSLKSESGDRRPCPAALCSQLEGINEKSYEELVGVSHKVTRLVPLKIVSSDEPNVEKMHQSTNLDSIHENGKEEDIDSPGTATSKFVEPLPLIKAVSSCYTGGYGNFSADLDAVQSTDIKSLVPCTSRKVAIISTGGDGNTSMEVKDSMDAATGASLCSSYEDTYNTIISSNKETADRAHGVFAKLLPKECCKIDDMGAISDSCSDTLILEKFAEKKRFARFKERVITLKFKALHHLWKEDMRLLSIRKCRPKSSHKKNELSVRTTCNGNQKNRSSIRSRFPFPAGNHLSLVPTSEIINFTSKLLSESQFKVQRDALKMPPLILDEKEKVTSKFISSNGLVEDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQGVGKLRKAFSAKTDLVVSGKKWNREVNAASLEILSAASVMADGIAGNKKMRSGGFLLGGYGNVKTSRGEDSIMERSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGHKDRKFLKVSPLCKQPLTPDVTQNVDDETCSDESCGEMDPSDWTDDEKAAFLQAVSSFGKDFTKIARCVGTRTQEQCKVFFSKARKCLGLDLVHSIPGNVGSPVNDDGNGGGSDSDEACVVETGSVVGTDKSGTKTDEDLNTYHDESNPVEGRNLSSELNESKEVNGTVDLEDVNMVSGACAIKVESKLGSDVSEAVSCSPDKSGSISGQAAIVVSDSIEVGKDKAKKLGGAGTEVFSAPGTIESHKCTSVAVDTLVSEVSSGGLGNELERQRVSSPQCLDRDDKHEADTGVVVELKSSVQDSSTTVNASLSSVGNSSGLSFDTENKHVSLGKPHISASSVTVNELHTTANSLLQNAAAADVQCEKTGSQDRQSSTCDIQGSRDMRCHNSISNGDHQLPIPGNQVEAASILQGYPLQVPIKKEVNGDMNCSSSAAELPLMSPKTEQTDDHFKTMLRHSSDSEKTSRNGDVKLFGKILTNPSSTQKPNLTKGSEENGTHHPKNSNKASSLKYTSHHNNTDGNLKILKFDRNDRNDYLGLENVPMRSYGFWDGNRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQQSLQAFAKNNERHLHGASAFSTRDINGSNPVIDYQMFRSRDSPKVQPFVVDVKHCQDVFSEMNRRNGFEAISGLQQQGRGMMGMNSVGRPGILVGGSCSGVSDPVAAIKMHYSNADKYGGQTGSIAREDEPWGGKGEVGR. 1709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07453 1708 Coils Coil 430 457 - -
Seca7g07453 1708 ProSiteProfiles SANT domain profile. 1022 1070 IPR017884 -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1456 1496 - -
Seca7g07453 1708 Gene3D - 784 856 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 236 259 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1689 1708 - -
Seca7g07453 1708 SMART sant 1020 1068 IPR001005 -
Seca7g07453 1708 SMART sant 804 852 IPR001005 -
Seca7g07453 1708 SUPERFAMILY Homeodomain-like 791 851 IPR009057 -
Seca7g07453 1708 Gene3D - 989 1076 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1004 1023 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1 151 - -
Seca7g07453 1708 SUPERFAMILY Homeodomain-like 1021 1070 IPR009057 -
Seca7g07453 1708 CDD SANT 1024 1062 IPR001005 -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1007 1021 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 116 151 - -
Seca7g07453 1708 ProSiteProfiles SANT domain profile. 803 854 IPR017884 -
Seca7g07453 1708 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1704 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 236 271 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1482 1496 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1106 1141 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 8 45 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 76 111 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 165 223 - -
Seca7g07453 1708 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1024 1073 IPR017930 -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1113 1127 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 1457 1472 - -
Seca7g07453 1708 MobiDBLite consensus disorder prediction 199 222 - -
Seca7g07453 1708 Pfam Myb-like DNA-binding domain 807 848 IPR001005 -
Seca7g07453 1708 Pfam Myb-like DNA-binding domain 1022 1063 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07453 Seca-Chr7 177954253 177964992 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g07453 Myb_DNA-binding 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07453 - - gmx:100810588 2543.84