Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07413 ATGGAAATCACAATCACATCAAGAGAAACAATCAAACCATCCTTGCCCACACCAGATGAACACAGATTCTTCCAACTCTCTCTGTTTGATCAGCTTCAACTAGTCACCTATTTACCAATGGTTTTATTTTACCCCAAAAAGGAAGGCCTCCCAGAACCCTCCCATCTTATTGCTCAATTGAAAAAATCACTGTCTGAGATACTAACCATTTTCTACCCTATAGCAGGGAGAAGAAAAGATCACACCTTTATCACTTGCAATGATGAAGGTGCTCTTTACTTAGAAGCCAATGTGAACCATAACATGGATGAGTTCCTCACACCACCTAAGCTAGAATATCTAAATAAATTGCTTCCATGTGAGCCTAATAAGATGCACAAAAATAGAGAAGTGTTACCCCAAGTACTTATACAAGTGAACATTTTTAGTTGTGGTGGAATAGCTATAGGTACATGCAATCTTCACACCCTCCTTGATGGTTGTTCTGGCAGCCTCTTCCAAACTACTTGGGCTGCTATATGCCGTGGCTCTAGAGAGGAAGTACCAAGCCCTGATTTCTGTTCTGCTTCTTCTTTCTTTCCACCAGCAAATCATTTGATTTTGCATGATCATGTTTCTCAGAATAATGAAAACAAAGATATACAAAAAATGTGCTCTACAAGAAGATTTGTGTTTGATGCAGGATCCATCAATATTCTTAGAGCTGAAGCAAAAGATGATGATGATGATGAAAGGTTGAAATCTCCTACAAGATATGAAGCACTAGCTGCTTTCATTTGGAAACATATGACACTTGCATGCAAGATGGAATCTGGTGATAGCACAAGACCAGCAGTGGCTATTCATATTGTGGATATGAGGAGGAGGATGGGTGAGCCTTTCTCTAGATACACCATAGGCAACATTTTGTGGCCAGTAATGGTATTTTGTGAAACAGTCTATGCAGACACTGATATTAGATATTTGGTTAGCATTGCCAGAGAGAAATTTGGAAAGCTCTCAAGGGAATTGTTTTTAAAAGTGAAAAGTGATCCAAATATTCTAGGGAGCAATGAGTGTGTGGATATGCCTCAAGGTATAGAAACAAGAAGTCCAATTCCAATTGTGTTGACAAGTTGGTGTGGTTTGAATTTTGATGAGCTGGATTTTGGTTGGGGGAAGCCTTTGTGGGCTGGTGTTAGAGGAGGTGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGCAGGCATGGAAGCTTGGCTGACAATGGAAGTGCAACATATAGCTATGTTGGAAAAAGATATGGAGTTTCTCAAATTAGCTTTGTCTAATCCAAGTGTTCCAAACATATAA 1344 0.3951 MEITITSRETIKPSLPTPDEHRFFQLSLFDQLQLVTYLPMVLFYPKKEGLPEPSHLIAQLKKSLSEILTIFYPIAGRRKDHTFITCNDEGALYLEANVNHNMDEFLTPPKLEYLNKLLPCEPNKMHKNREVLPQVLIQVNIFSCGGIAIGTCNLHTLLDGCSGSLFQTTWAAICRGSREEVPSPDFCSASSFFPPANHLILHDHVSQNNENKDIQKMCSTRRFVFDAGSINILRAEAKDDDDDERLKSPTRYEALAAFIWKHMTLACKMESGDSTRPAVAIHIVDMRRRMGEPFSRYTIGNILWPVMVFCETVYADTDIRYLVSIAREKFGKLSRELFLKVKSDPNILGSNECVDMPQGIETRSPIPIVLTSWCGLNFDELDFGWGKPLWAGVRGGDQETLPNVAVIMETDAGMEAWLTMEVQHIAMLEKDMEFLKLALSNPSVPNI. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07413 447 PANTHER F21J9.9 4 436 - -
Seca7g07413 447 Gene3D - 216 438 IPR023213 -
Seca7g07413 447 Gene3D - 1 203 IPR023213 -
Seca7g07413 447 Pfam Transferase family 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07413 Seca-Chr7 177413992 177415335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07413 60 430 Monolignol Biosynthesis Gene Families AT5G48930 24.685 1.31e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07413 - K13065 gmx:102668997 761.911