Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07399 ATGAATAACTCTGTTTCAGATAACAGTTTTATTATTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAACAAAGGTGAAGTTGATGGTAACGATTCTGATTCTTCCAATTACTCAAATGAAAACCCACCACAGAGGAAACCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTACCATCACCAAATATTGGATTTCTGGGCACTCCCTCTTTGTCAAGATTAAGCAGTTCTTTCCTTTCTACATCTCTAACAAGGAGGCACACTCCTGAAACACTTCCTTCAGTGACAAAACCTCTCATACAGCCTATAGAAGATGAGCAGCAACAGAGACGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGATTGGGCTCTCTATCTTGTTCATTTTTGGGATTATTTCCTTCTATACTGGGTTGCTCTTGCGTACCTGCTTGGACAGTGAACCTGGTCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTTTCATTTCAATAGTATTGTATGTGGAGTTGTATGGTTGTTGCATTGAATATATAATTTTGGAGGGTGACAACCTCTCTACCTTATTCCCAAATGCATACTTAAATTTGGGTGGAATTGAATTGAATTCACAAACTCTGTTTGCTGTGATTGCCACCTTGGCTGTTCTTCCTACTGTTATGCTCCGTGACCTAAGCGTTCTCAGTTACATCTCAGCTGGTGGGGTTGTTGCATCAGTTTTGGTGATTATCTGCTTGTTCTGGGTTGGCATAGAGGATGTTGGCTTTCATAGCAAAGGGACAACACTCAACCTTGCAACTTTTCCTGTTGCTCTGGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATACTTCCATGGCAAATCCAAACCAATTCCCTGCAGTGCTCTTAGCATGTTTTGGAATTTGTACCTTGCTGTATGCTGGGGGTGCTGTTATGGGATACAAAATGTTTGGAGAAGCTGTACTCTCTCAGTTCACTCTTAACCTGCCCCAAGAATTGGTGGCATCCAAGATTGCTGTTTGGACTACGGTTGTTAATCCATTTACCAAATATCCTTTATATGTGCCATGCTTTCAAATTACAATGTTTGAACTGGGATCTTATGACATGTCATTTCTATTGCATTGCATTCTCTCCATAGAGTATTCCTACACTGAAAATGAAGTAAGATTGTTTTTCTTAATTCGCATCACGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCATCAAACCATGCCAAGTCTTACCTATATGCCATCCTCATCAGAACAGGACTGGTAGTTTCTACTCTGCTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGATCATTACTTACAATGCTTGTTACTTTGATACTACCCTGTGTTTGTTTCCTAAAAATCTTGCGGGGCAAAGTCACACGATTGCAGGTATGA 1560 0.409 MNNSVSDNSFIIESDEEDEEKDLNKGEVDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPETLPSVTKPLIQPIEDEQQQRRINVLCGVGILSTPYAAKEGGWIGLSILFIFGIISFYTGLLLRTCLDSEPGLETYPDIGQAAFGTTGRIFISIVLYVELYGCCIEYIILEGDNLSTLFPNAYLNLGGIELNSQTLFAVIATLAVLPTVMLRDLSVLSYISAGGVVASVLVIICLFWVGIEDVGFHSKGTTLNLATFPVALGLYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTLLYAGGAVMGYKMFGEAVLSQFTLNLPQELVASKIAVWTTVVNPFTKYPLYVPCFQITMFELGSYDMSFLLHCILSIEYSYTENEVRLFFLIRITYALTISPVAMSLEELIPSNHAKSYLYAILIRTGLVVSTLLIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCFLKILRGKVTRLQV. 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07399 519 PANTHER OS05G0424000 PROTEIN-RELATED 123 510 - -
Seca7g07399 519 MobiDBLite consensus disorder prediction 1 53 - -
Seca7g07399 519 MobiDBLite consensus disorder prediction 30 53 - -
Seca7g07399 519 Pfam Transmembrane amino acid transporter protein 123 515 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07399 Seca-Chr7 177273786 177280233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07399 1 483 Amino Acid or Auxin Permease AAAP Family AT2G39130 60.338 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07399 K15015 - gmx:100775840 748.429