Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07393 ATGGCAAAGGCAAGGGACAGAACCGAGGATTTCAAAGATGCTGTGCGCCAGAGTGCTCGCTCTTTGGGTTACGATGAGGCTAAATTGGCGTCCATTTTGGCATCTTTCATTATTCATAAACCTCCTCAAAGATCTCCATTTTCCAAAGCTGCATTGAAGACGCTTGAGAGTATTGGTGAATTGGAACAGTTTTTGTTAAAGCATAGAAAGGACTATACAGATCTACACCGCACAACTGAACAGGAGAGAGATAGCATTGAGCATGAAGTTAGTTCTTTTATTAAAACTTGCCAGGAACAAATTGACGTTCTTAAGAATAGTATAAATCATGAAGAGGAAAATTCGAAAGGTTGGCTTGGCATTGCAACTGCAAAGTCTAATGCTGACACCATTGCCCATAAACATGGGGTGGTTTTAATTTTAAGTGAGAGACTCCATTCGGTTACAGCAAAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCAATACCACGAAGAAAACTTAATCGTGTGACCAGGAAGGATTCTACTGAAACCTCTAAATCAGCAGATGACGTGGAGCTCAGAGAACCTGATGAGATACGAAGTGAGCCTCTAAGACTCCAACAGCAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAATCTTCTAGATACAGTCCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCATGTCTACACATGTTTTGCAACAAGCTCAGCAAATTGAGCTTCTGTATGAGCAGGCCGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGCGTAATAGCAGCAGCAGGACATTTCTTTTGCTGTTTCTGTTTGTGCTTACTTTTTCCATCCTCTTTCTTGATTGGTATAGTTAA 933 0.4116 MAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPQRSPFSKAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIEHEVSSFIKTCQEQIDVLKNSINHEEENSKGWLGIATAKSNADTIAHKHGVVLILSERLHSVTAKFDQLRAVRFQDAINRAIPRRKLNRVTRKDSTETSKSADDVELREPDEIRSEPLRLQQQLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07393 310 SUPERFAMILY t-snare proteins 56 274 IPR010989 GO:0016020|GO:0016192
Seca7g07393 310 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Seca7g07393 310 MobiDBLite consensus disorder prediction 175 198 - -
Seca7g07393 310 Gene3D - 213 307 - -
Seca7g07393 310 Coils Coil 94 114 - -
Seca7g07393 310 FunFam Syntaxin-81 like 213 307 - -
Seca7g07393 310 PANTHER SYNTAXIN-18 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07393 Seca-Chr7 177169939 177174847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07393 65 310 SNARE and Associated Proteins AT1G51740 76.113 1.18e-116 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07393 K08492 - gmx:100778011 539.65