Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07352 ATGCCGCCCCCTACTCAACCTCCAACAGAAACTGATCCGTCTACACAAGAGGTATGTGGCAAGAGGGAACCTAGTAGGCCTGCTTCTAATTGTTGGACTCATTTTAAAAGGGAAGGGGATAAGGTTGTATGTAACTACTGTGGCAAAACCTATGCATGCAATAGTTCTAACCATGGGACAACAAACTTGAACAAACATTTGAAAGTATGTGATAAGAACCCATCTAGGGAAATTGATAAGAAACAAAAGACTTGGAAAGCAGTGTGA 267 0.4157 MPPPTQPPTETDPSTQEVCGKREPSRPASNCWTHFKREGDKVVCNYCGKTYACNSSNHGTTNLNKHLKVCDKNPSREIDKKQKTWKAV. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07352 88 SMART bed5 26 73 - -
Seca7g07352 88 ProSiteProfiles Zinc finger BED-type profile. 26 77 IPR003656 GO:0003677
Seca7g07352 88 PANTHER OS03G0264950 PROTEIN-RELATED 9 81 - -
Seca7g07352 88 SUPERFAMILY beta-beta-alpha zinc fingers 29 76 IPR036236 -
Seca7g07352 88 Pfam BED zinc finger 29 68 IPR003656 GO:0003677
Seca7g07352 88 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07352 Seca-Chr7 176586480 176586746 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g07352 zf-BED 6.4e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07352 - - mtr:112417953 90.8929