Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07344 ATGCTGATTCGGAGGAGGGTGATGAGCTGGAGAAGGGTGGCCAAGTCTCTCCAAGCTCTGCTAGCTCATGCCTTGCTCTTCTCCTTCACTCTTCTTCTTGCTCTCAAGCTTGACCATCTAGTCCTTTGCTCATGGTGGACTGTATTTTTCCCTCTATGGTCTTTTCATGCTGTCGTAGCACGGGGCAGATTTTCCTTGCCTGCTCCTGCGATGCCTCATGATCGCCAATGGGCTCCATGTCATGCAGTCATAGCAACACCACTACTTGTTGCATTTGAGCTACTTCTTTGTATACATCTTGAGAGCAATTACGTGGTGAATTTAAAGATTGTCTTCATACCTCTGATTGCTTTTGAACTGATGATTTTGGTTGATAATATCAGGATGTGTAGAGCTTTGATGCCTGGAGATGATGAAAATTTGACTGATGAAGCAGTATGGGAAACTCTTCCTCACTTCTGGATTTCGATATCCATGGTCTTCTTTATTGCTGCTACAGTGTTCACCCTTCTAAAGATAACCGGTGATGTTGCTGCACTAGGCTGGTGGGACTTATTTATTAACTTCGGCATTGCACAGTGCTTTGCGTTTCTTGTTTGTACAAAGTGGCACAATCCAATAATTCATGGAAACTGTCACATTACAGAACCATGTTCATCGTCAAATAGCATAACATACCTGGACTGGAGTAGAGGAGGCATAGTTGTTTCTGTAGATGAAGATAGGCAGCAAAATGGGTTATGCAGTCTGCAGGACATTGGCGGGCATATTATGAAAATTCCATTTATTGGTTACCAAATACTTCTTTTTATGCATTTAGAGGGAACACCATCAAGTGCAAAAGATATACCAAACTGGGTCATTTTTTCTCCCCTTTTTTTATTGCAAGGAGCTGGGGTTTTATTTGCAACATATAGATTAATAGAGAAGATAGTTCTTTTACTCTATAGTGGAGATATTCCTAGAAGCTACACATCTATAGCATCTAAATCCCGTGACTGCTTTGGGTTCTTGCATCGTGGGCCAAGGTATCAGTATAGATCTGATTGGCTAGAAAAAGGAATTTATCTTTGGTAG 1077 0.416 MLIRRRVMSWRRVAKSLQALLAHALLFSFTLLLALKLDHLVLCSWWTVFFPLWSFHAVVARGRFSLPAPAMPHDRQWAPCHAVIATPLLVAFELLLCIHLESNYVVNLKIVFIPLIAFELMILVDNIRMCRALMPGDDENLTDEAVWETLPHFWISISMVFFIAATVFTLLKITGDVAALGWWDLFINFGIAQCFAFLVCTKWHNPIIHGNCHITEPCSSSNSITYLDWSRGGIVVSVDEDRQQNGLCSLQDIGGHIMKIPFIGYQILLFMHLEGTPSSAKDIPNWVIFSPLFLLQGAGVLFATYRLIEKIVLLLYSGDIPRSYTSIASKSRDCFGFLHRGPRYQYRSDWLEKGIYLW. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07344 358 Pfam Transmembrane Fragile-X-F protein 35 295 IPR019396 -
Seca7g07344 358 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07344 Seca-Chr7 176501439 176509072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07344 8 343 C3H Transcription Factor Family AT1G18470 68.328 5.12e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07344 - - gmx:113000756 583.563