Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07336 ATGCAAACCCACTCTTTCTCCTGCATTTCCTCTTGTGGGAGTGAGAGTGCTTGCTTAGAAGCTGATGAGGTTGATGATGAAGAGTCCATCTCCCTCTCCCTCTCCCTTCTAGGCCACCAAAAATCAGAAGTCTTTACCCCAAAAAACCACCCTGCTACTACTATGCCACCCCTTCAAAATCAAAACCCTACATCTTATTATAATGACCAGAGTGGTGTAACTGTTGCCCTTCACATTGGCCTTTCCACCACTGCACCAACCACCACCAATAGCAAACCTGACCATTCCTCTTCAACTCCGATTCAGGGTCACCAATATTGGATCCCTACTCCTGCACAAATCCTAATAGGACCCACCCAGTTTTCTTGCTCAGTCTGCAACAAAACATTCAACCGTTTCAACAACATGCAGCAGATGCATATGTGGGGACATGGATCCCAATATAGGAAAGGACCAGAGTCATTGAAAGGGTCAAAACCAGCTTCTTCAATATTGAGGCTTCCTTGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAAACTACCCAAGGTCAAGGCCACTCAAGGATTTCAGGACCCTTCAAACACACTACAAGAGGAAACATGGAGGGAAGTCATTTGAATGCAGGAAGTGTCAAAAACCATTTGCTGTGAGAGGAGATTGGAGGACACATGAGAAGAATTGTGGGAAGCTTTGGTTCTGCATCTGTGGTTCTGATTTCAAACACAAGAGATCCCTTAAAGATCATGTCCGTGCATTTGGCAATGGCCATGCTCCACACACCTTGAGTAGTTGTAATGATCAGTTAGCAGATGATAACAGTGAAGTGGCTGTTGTAACTTGCAATTAA 852 0.4472 MQTHSFSCISSCGSESACLEADEVDDEESISLSLSLLGHQKSEVFTPKNHPATTMPPLQNQNPTSYYNDQSGVTVALHIGLSTTAPTTTNSKPDHSSSTPIQGHQYWIPTPAQILIGPTQFSCSVCNKTFNRFNNMQQMHMWGHGSQYRKGPESLKGSKPASSILRLPCYCCAEGCKNNINYPRSRPLKDFRTLQTHYKRKHGGKSFECRKCQKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLSSCNDQLADDNSEVAVVTCN. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07336 283 PANTHER ZINC FINGER PROTEIN WIP2 40 270 IPR043584 GO:0003700|GO:0010468
Seca7g07336 283 FunFam Zinc finger protein WIP2 176 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07336 Seca-Chr7 176365572 176367043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07336 26 264 C2H2 Transcription Factor Family AT1G13290 67.742 2.95e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g07336 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07336 - - aprc:113870355 390.578