Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07289 ATGAGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGGCTGATATCATCAAGAACCCATTTAACCAACACTCATATAACAGAACCACTGCAGTGTGTGTATGGTGTGAATGCTAATGTTAATGGTGGTGCTTCTTCTACTTTTCCTCCACAAAATAGCTATGACCCTCATAATAACATGATGGTTGGGGACGTTTTCTTTCCTCGTGGCTTCACTCACTATCCTCATCATCATCATGATCACTATTCCTCCACTAGTGTCAATCCAACTGCATCAAGTAACAATGTTGCTGTTGCCACTGCTTCTGCATTCTGTAGCATAGAAAAAGGGTGGCCTGGTCTTGATTCTGGGAACAATAGGTGGCCTAGACAAGAGACTCTTTCTCTTCTAGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGTAAAGCTAGTAGACAAGATGGAAAGCATTACAGATTCTTCAGGCAGCTTGAAGCAATATGTGGAGAAGCAGCAAGCAGTAGTGCTCATGCTTCAACTTCAGATAAAACCCATAATCATCATCAGGGTGCTGGAAACACTACTGTTGGTGTTCAAACTCAAAGTTTCACAACTAACCATGACAATAATGGTGGTGACTTTCATAATAATAATAACAACCTCAAGTGTTCAGAGAGCCTGAGTTTCTCAAATTCATCTGAATTTGAGACATCTTCATCTGAGAACAATGATGAGGATCTTTCAGCTATTGCATACATGATGAAGCAGTCAAGGGATAAGCAGAAAGGGTTAGACTTAGACCAGAGACAAAGTAGTAGTCATAGGAGGGTGAGAAAAAGCTGGAGGGCTAAAGTTGAGGAGATTGTGGATTCTCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGTGTTGTTGAACAAAGAGAGAAAGAAATGGCATCTAAAGAGGAAGAGAGGAAGAAAAAAGAGTCAATGAGGTTTGACCAAGAAGTGCATCAACTTTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGGTACAAGTTGTAAAGAAACACATTGGGATAGAACTTGAAGGAATGGTTGAAGAACCAACAAATAATAATAAGAACAAGAGATCAGTGCTGCAGGAGGCAGTAAATGATGTTAATAATGAGTATCCTTGTGAAGGTGTGGATCATAAATGGACAGAGATGGAGATTTCAAATTTGATACAATTAAGGACTGGTTTTGAACAGCGAGTCAGAGAAAATGGGTATTTGGAGAATGGAATTTGGGGTGAAATAGCAGAGAAAATGGTGTGTTTGGGGTTTGATAGGAATGCAGATGAGTGTAAGCAAATATGGAATGAGATCAGCATCTCTCTGAGAAGGACAGTGGAGTGTGGTGGTAGTGCTAAAACAAAGCCTTGGTGTTTGGGACTTAAGCTGACAGATGATGATGACATTTGA 1596 0.406 MSDPYGLPEDLRRLISSRTHLTNTHITEPLQCVYGVNANVNGGASSTFPPQNSYDPHNNMMVGDVFFPRGFTHYPHHHHDHYSSTSVNPTASSNNVAVATASAFCSIEKGWPGLDSGNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGEAASSSAHASTSDKTHNHHQGAGNTTVGVQTQSFTTNHDNNGGDFHNNNNNLKCSESLSFSNSSEFETSSSENNDEDLSAIAYMMKQSRDKQKGLDLDQRQSSSHRRVRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREKEMASKEEERKKKESMRFDQEVHQLWAKEKAWVEARDAALVQVVKKHIGIELEGMVEEPTNNNKNKRSVLQEAVNDVNNEYPCEGVDHKWTEMEISNLIQLRTGFEQRVRENGYLENGIWGEIAEKMVCLGFDRNADECKQIWNEISISLRRTVECGGSAKTKPWCLGLKLTDDDDI. 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07289 531 Gene3D - 121 183 - -
Seca7g07289 531 Gene3D - 444 506 - -
Seca7g07289 531 FunFam trihelix transcription factor PTL-like 121 183 - -
Seca7g07289 531 PANTHER FI21293P1 93 510 - -
Seca7g07289 531 MobiDBLite consensus disorder prediction 297 317 - -
Seca7g07289 531 ProSiteProfiles Myb-like domain profile. 443 501 IPR001005 -
Seca7g07289 531 ProSiteProfiles Myb-like domain profile. 119 178 IPR001005 -
Seca7g07289 531 Coils Coil 343 370 - -
Seca7g07289 531 Pfam Myb/SANT-like DNA-binding domain 442 510 IPR044822 -
Seca7g07289 531 Pfam Myb/SANT-like DNA-binding domain 119 206 IPR044822 -
Seca7g07289 531 CDD GT1 119 185 - -
Seca7g07289 531 SMART sant 117 180 IPR001005 -
Seca7g07289 531 SMART sant 440 503 IPR001005 -
Seca7g07289 531 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07289 Seca-Chr7 175820667 175823149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07289 120 506 Trihelix Transcription Factor Family AT5G03680 43.035 4.83e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g07289 Myb_DNA-bind_4 4.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07289 - - gmx:100787750 664.07