Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07279 ATGGCCACTGAAGATTACCCTCTTCTCGACTCTCCCTCCCACGCGCAGCCCCACCTCCACGCTCCCACGCGCCACCACTTTACTTCCTCCTCCTCTTCCAGTCCCACCACTCTCCCTGCTGCCGACAACGGCTACCACCGCCCTTCCTTCTCCGACGCTGCCGACGACTCCTCCGCTCCGGCCAAATCCGGATCCACCGTCCTCATCCCTAACTCCAAGCGCGCCTCCGCCGCCGGTATCTCCTATTACTACAACAAGAAACCAAAGTCCTCCTCCGGTGCAGATTCCGATCCGGCGAACGACGCGGCGTTTCACGGTGGCGATTACCGGAAGGACCGGGAGGAGTGGAGCGACACGGCGATCGCGTGCCTATTGGAGGCGTACACGGAGAAATTCAAGCAGCTGAACCGCGGGAACATCCGTGGAAGAGACTGGGAGGAGGTGGCGGCGGCGGTGGGGGAGCGGTGTGGCGGCGGCGGTGGGGAGAAGCAGTACAAGAGCGTGGAGCAGTGTAAGAACAAGATTGATAATTTGAAGAAGAGGTATAAAGTGGAGCTTCAGAGAATTGGGAGTGGGGGAATTACCACTAGTCACTGGCATTGGTTTAAGAAGATTGAAGCAATTGTTGGCAATTCTCTATCACTGAAAACTGTGTCTGATGATGAGAAGGGCGGTGTTGGTGGTGCTTCTTCTTCTTCTTCTACTGCTAGACAAACCAATAACAGATATGCACCTAGCAATGCTGCCATGGCAAACAACCTCAAATTGAAACCAGCATCCAATCTAAAATGGCATCGAGTTTTATTTAAAATTAGTGGTTCGGCATTGGCTGGAAACTGCCAGAATATTGACCCCAAGAGACTTTACTGGAAACTGCAATTCAACTGCTTCCTTCCATCATTAGGTGGCAATGCAGATTGCTAG 924 0.5335 MATEDYPLLDSPSHAQPHLHAPTRHHFTSSSSSSPTTLPAADNGYHRPSFSDAADDSSAPAKSGSTVLIPNSKRASAAGISYYYNKKPKSSSGADSDPANDAAFHGGDYRKDREEWSDTAIACLLEAYTEKFKQLNRGNIRGRDWEEVAAAVGERCGGGGGEKQYKSVEQCKNKIDNLKKRYKVELQRIGSGGITTSHWHWFKKIEAIVGNSLSLKTVSDDEKGGVGGASSSSSTARQTNNRYAPSNAAMANNLKLKPASNLKWHRVLFKISGSALAGNCQNIDPKRLYWKLQFNCFLPSLGGNADC. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07279 307 FunFam Aspartate/glutamate/uridylate kinase family protein 116 184 - -
Seca7g07279 307 Coils Coil 168 188 - -
Seca7g07279 307 MobiDBLite consensus disorder prediction 1 70 - -
Seca7g07279 307 Gene3D - 116 184 - -
Seca7g07279 307 MobiDBLite consensus disorder prediction 226 244 - -
Seca7g07279 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 84 238 IPR044823 -
Seca7g07279 307 MobiDBLite consensus disorder prediction 220 244 - -
Seca7g07279 307 MobiDBLite consensus disorder prediction 56 70 - -
Seca7g07279 307 MobiDBLite consensus disorder prediction 23 40 - -
Seca7g07279 307 Pfam Myb/SANT-like DNA-binding domain 113 208 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07279 Seca-Chr7 175696022 175697864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07279 106 228 Trihelix Transcription Factor Family AT3G14180 39.837 3.51e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g07279 Myb_DNA-bind_4 8.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07279 - - gmx:100791426 370.548