Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07271 ATGGATTCTGTAATAAGTAGCATGCTGCTTTTCCTGTTGACATGTACTATCATACATCATGCCCTTCGTTCATTCCATGCAAGGAGCAAAAAGAAGCTTCCACCAGGTCCTTCCATTCTCACTATCATGAGAAACCTTTTTGAATTGTACAACAAGCCACAACAGACACTTGCAAAGCTTGCTGATTTCTATGGCCCAATTATGCAAGTGAAGATAGGCCAAGGAACCACCATAATGATCTCCTCTGCTGACATGGCCAAAGAGATTCTCCAAACCAATGATGCATTGTTATCAGACAGAACAGTTCCTGATAACACAACTACTCACAACCACAATCAGTTTAGCTTGGTCTTCCTCCCTGTTTCACCTCTCTGGCAGGATCTCAGGAAAATATGCCATCACAATTTGTTTTCCAACAAGACTCTTGATGGAAGCCAAGATCTTAGGCGCAAGAAACTGCAAGATCTCCTCAATGACATGCATCAAAGCAGCCTAAACGGTGAAGCAGTTGATATTGGAAGAGCAGCTTTCAAGGCTTGCATTAATTTCTTATCACACACTTTTGTCTCTCAGGATTTTGTTCTGTCTCTTGATGATGAATATAAGGACATTGTGTCCACTCTCTTGAAAGCAGTTGGAACTCCAAACGTGGCTGATTTTTTCCCAGTTTTGAAGATAGTTGATCCACAAGGGATCAGAAGGCACACATCCAATTACGTTTCAAAGGTGTTCCATATCTTAGATCATGTGATTGACCAACGCTTGAAGATGAGACAAGAGAAACATTATGTCACAAACAATGACATGTTGGACACCCTGCTTGACATTTCTGAACAGAACAGCCAGAAGATGAATAGAAAACAGATTAAACATTTGTTACTTGATCTCCTTGTGGCGGGAACAGACACAACAGCATATGGATTAGAAAGGGCAATGAGTGAACTTGTCCACAACCCAGAGGCTATGTCAAAAGCCAAAAAGGAATTGGAGGAAACCATTGGAAAAGGTAATCCCATTGAGGAATCAGACATTGGTAGGCTTCCATATTTACAAGCAGTGATAAAAGAGAGCTTGCGAATGCACCCACCAGCTCCACTTTTACTCCCTCGAAAAGCAAAGGTAGATGTCGAAATTGGAGGGTTCACAATCCCACAGGGTGCACAAGTCCTAATCAATGAGTGGGCAATTGGGAGGAGCCCAAACACATGGGATAATGCAAATTTATTTTCTCCTGAGAGATTTTTGGGATCTGAAATTGACGTCAAAGGTAGACACTTTAAGCTCACCCCATTTGGCAGTGGGAGACGAATATGCCCTGGCTCACCACTTGCTGTTAGAATGCTGCATTTGATGGTGGGATCACTCATCAACTCTTTTGATTGGAAACTTGAAAACAATTTGGACCCAAAGGACATGGACTTGGATAAACCCTTGCGAGCAATTCCAGTTATAATAAGCAACTAA 1464 0.4194 MDSVISSMLLFLLTCTIIHHALRSFHARSKKKLPPGPSILTIMRNLFELYNKPQQTLAKLADFYGPIMQVKIGQGTTIMISSADMAKEILQTNDALLSDRTVPDNTTTHNHNQFSLVFLPVSPLWQDLRKICHHNLFSNKTLDGSQDLRRKKLQDLLNDMHQSSLNGEAVDIGRAAFKACINFLSHTFVSQDFVLSLDDEYKDIVSTLLKAVGTPNVADFFPVLKIVDPQGIRRHTSNYVSKVFHILDHVIDQRLKMRQEKHYVTNNDMLDTLLDISEQNSQKMNRKQIKHLLLDLLVAGTDTTAYGLERAMSELVHNPEAMSKAKKELEETIGKGNPIEESDIGRLPYLQAVIKESLRMHPPAPLLLPRKAKVDVEIGGFTIPQGAQVLINEWAIGRSPNTWDNANLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMVGSLINSFDWKLENNLDPKDMDLDKPLRAIPVIISN. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07271 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 476 - -
Seca7g07271 487 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 Pfam Cytochrome P450 34 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 SUPERFAMILY Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Seca7g07271 487 Gene3D Cytochrome P450 21 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 FunFam Cytochrome P450 76C4 25 483 - -
Seca7g07271 487 CDD CYP76-like 64 482 - -
Seca7g07271 487 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07271 487 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07271 Seca-Chr7 175599720 175601293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07271 4 483 Cytochrome P450 AT2G45550 41.948 5.88e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07271 - - gmx:100800810 704.131