Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07264 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCTAACTCTTCCAATGGTGGTGGTGGGAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCCCAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTAAGAGCAAAGAAGAAGGACACAGGGACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGCATTGTGAGGCTATATTTCACATTTCAAGACACATTTTCTCTGTATATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTTACTGAGGATGAGGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAGTTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACAGGTGATGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGACAAGGCCTGCACATTTGTCGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGATCTCTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGATTACTTTTCAGAGGAATCAAGAGACCTTATTGACCGGCTATTGATATTTCGAGCCCATGAGACATGTGCTGGGGTTTGGGAGCAGGCAAGGGTGCTTTACACCAATGATACTCAACGCCTCTATGGTGTTTGCCACAATCTCTTGAGTACCATTGTCCCTAGACGACTTGATGGATCCATGGCTGAGTACTTGGGCAAAGTTCATGGTCTTTTACATAACTTCAATGAACTCTTGCCCCCTGCTTCCACTCCTGCCCAAGAACTGGAGCAACGCCAAACTTTCTTTGTGTTGATGGCATTGTATGGGCTCCCAGACGAGTATTCTTTGGTCCGTGATCAGATTTTGGGATCTCCGACTGTGCCCACTTTGACCTCCACTTGGTCAACGTTGTTGCGTGTGCCGCCCAAGTCATCTATTGACATACCTTCTCCTATCACCCTTGTTGACTCTTCTGCCTTAGTATCCCAGCGTGATGATCGTAGCCGCTCTCGCAAACCAGGCAAGACTCGTCACAGCTATGCAATTATGATGCAGGACCTGGACCCTAGCAGGAGACCAGGTGCAGGACCTGATGGTTATGCTACTCTGAAAAGGCATCCCTTTTTCAAGGGGGTTGACTGGAATAACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAACCTGGGACTCAGTCCCCTGCAGGTGATGATGGTCAAGAGTCATCTTGGAGTCCTGCTCACGTTGGGGATGGTTCTGCAGCTTCTGTTAGACAACCTGATGGCGCTACATCGTCTTCCGAGGGTACTGGTCACATAACCCGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAAATAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAGCCAAAGTTGATCTATGTGGATCCATCAAAATTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACTAGTCCATCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCAAATCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1974 0.4367 MLEMEKDFDSKLKIQGNSNSSNGGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHSLGVIHRDIKPENLLLTGDGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSEESRDLIDRLLIFRAHETCAGVWEQARVLYTNDTQRLYGVCHNLLSTIVPRRLDGSMAEYLGKVHGLLHNFNELLPPASTPAQELEQRQTFFVLMALYGLPDEYSLVRDQILGSPTVPTLTSTWSTLLRVPPKSSIDIPSPITLVDSSALVSQRDDRSRSRKPGKTRHSYAIMMQDLDPSRRPGAGPDGYATLKRHPFFKGVDWNNLRAQIPPKLALEPGTQSPAGDDGQESSWSPAHVGDGSAASVRQPDGATSSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKITSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVMSFEDAKQRANQWKKAIEGLQNR. 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07264 657 Gene3D - 532 657 IPR011993 -
Seca7g07264 657 Pfam PH domain 554 656 IPR033931 -
Seca7g07264 657 Gene3D Phosphorylase Kinase; domain 1 46 131 - -
Seca7g07264 657 SUPERFAMILY PH domain-like 473 656 - -
Seca7g07264 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Seca7g07264 657 MobiDBLite consensus disorder prediction 428 472 - -
Seca7g07264 657 Gene3D Transferase(Phosphotransferase) domain 1 132 292 - -
Seca7g07264 657 CDD STKc_PDK1 46 291 IPR039046 GO:0004674
Seca7g07264 657 SUPERFAMILY Protein kinase-like (PK-like) 32 296 IPR011009 -
Seca7g07264 657 ProSiteProfiles Protein kinase domain profile. 48 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07264 657 MobiDBLite consensus disorder prediction 528 542 - -
Seca7g07264 657 MobiDBLite consensus disorder prediction 13 29 - -
Seca7g07264 657 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g07264 657 Pfam Protein kinase domain 50 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07264 657 FunFam 3-phosphoinositide-dependent protein kinase 1 528 657 - -
Seca7g07264 657 MobiDBLite consensus disorder prediction 495 542 - -
Seca7g07264 657 FunFam 3-phosphoinositide-dependent protein kinase 2-like 132 305 - -
Seca7g07264 657 Coils Coil 637 657 - -
Seca7g07264 657 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 494 - -
Seca7g07264 657 SMART serkin_6 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07264 657 FunFam 3-phosphoinositide-dependent protein kinase 2-like 46 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07264 Seca-Chr7 175455072 175470775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07264 1 299 AGC Kinase Gene Family AT5G04510 86.288 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Seca7g07264 Pkinase 5.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07264 K06276 - gmx:100801891 553.518