Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07240 ATGGCAAAGGCCATGGAGGAAATAAGAAGCGCGCCTTCTTCACGTCGACATGGAGATGATTCTTTGCCACATATTCACAAAGTGGAAGCTCCTCCTAAGCAGTCACTATTACAAGAAATCAAATATTCTATCATTGAGACTTTCTTCTCAGACGACCCCTTAGGCAAATTTAAGGACCAAAGCCACTCAAAAAAGTTTATTCTAGCCCTGCAATCAGTCTTCCCCATTCTAGATTGGGGAAGAGATTACAATATTACAAAATTTAAGGGTGATTTAATTGCTGGTTTTACTATTGCAAGTCTATGTATTCCTCAGGACATTGCATATGCAAAGCTTGCAAACTTGGATCCCCAATATGGACTACATACTAGTTTTGTGGCTCCTCTGGTTTATGCTTTCATGGGAAGCTCAAGAGATAATGCCATGGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGGACCATGCTTACTAATGAGATTAGTAACTACAGAAGTCATGAATATCTACGACTTGCATTTACTGCCACCTTCTTTGCAGGAATCACTCAGATGGCACTTGGAGTTTTTAGGTTGGGTTTCTTGATTGACTTCCTATCTCATGCTGCAATTTTGGGATTTATGGGTGGAGCTGCTATTACTATTGCATTGCAACAACTTAAAGGTTTGCTTGGCATAAAAGATTTCACTAAAAAAACTGACATTGTTTCTGTCATGTGCTCAGTTTGGAGTTCAGTGCACCATGGGTGGAATTGGGAGACAATAGCCATTGGAGTAGCATTCTTGGTCTTTCTTCTTATAGCCAAGTATATTGCTAAAAAGAATAAGAAATTCTTTTGGGTGGCTGCAATTTCTCCTATGATCTCTATTATAGTGTCTACATTTTTTGTGTACATTACCAGGGCAGACAAGAAAGGTGTATCAATTGTGAAAAATGTAAAAAAGGGTGTGAATCCAATATCTTTTAGTGAAATTTATTTTAGTGGAAAATATCTTGGTGCTGGTGTTCGAATTGGTGTGGTAGCTGGTATGATAGCACTCACAGAATCTATAGCAATTGGGAGAATATTTGCTGCAATGAAAGACTATTCATTGGACGGCAATAAAGAAATGGTGGCAATGGGAACAATGAATGTTATTGGTTCCCTGACATCATGTTATGTGGCTACAGGAGGTTTTGGTCGGTCAGCAGTGAATGATATGGCGGGGTGTAAAACAGCTGCATCAAACATTGTTATGTCAATTATTGTACTATTAACTATGATACTCATTACACCACTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCAATTATTATAGCTGCTGTGATGAGCCTTGTGGACATTAAGGCAATTGTTCTTTTGTGGAAGATTGACAAATTCGATTTTGTAGCTTGTATGGGAGCCTTTTTTGGTGTGATATTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGGGAGCTTCCAGGGACTGCTGTTTATAGAAACATCCAACAATATCCCAAAGCAACTCAGATTCCTGGCATGCTGATTATTAGAGTTGACTCTGCAATATACTTCTCAAACTCCAACTATGTCAAGGACAGGATTTTGAAATGGCTGACTGATGAAGAGGTCCAAAGGACAAGAAGTGAATTTCCCAAAATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATAGACACTAGTGGCATCCATGCATTTGAAGATTTATTAAAGAGCCTTCATAAAAGAGAAGTCCAGCTTCTCCTGGCAAACCCAGGGCCAATTGTAACAGAGAAGCTCAACACATCCAAGTTATCGAGCTTGATTGGGGAAGGTAATATTTTTCTATCGGTGGCTGATGCCGTTGCAACTTTTGGTGTAAAGGGTGGAGAAGTGTGA 1950 0.3954 MAKAMEEIRSAPSSRRHGDDSLPHIHKVEAPPKQSLLQEIKYSIIETFFSDDPLGKFKDQSHSKKFILALQSVFPILDWGRDYNITKFKGDLIAGFTIASLCIPQDIAYAKLANLDPQYGLHTSFVAPLVYAFMGSSRDNAMGPVAVVSLLLGTMLTNEISNYRSHEYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAILGFMGGAAITIALQQLKGLLGIKDFTKKTDIVSVMCSVWSSVHHGWNWETIAIGVAFLVFLLIAKYIAKKNKKFFWVAAISPMISIIVSTFFVYITRADKKGVSIVKNVKKGVNPISFSEIYFSGKYLGAGVRIGVVAGMIALTESIAIGRIFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGGFGRSAVNDMAGCKTAASNIVMSIIVLLTMILITPLFKYTPNAVLASIIIAAVMSLVDIKAIVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGELPGTAVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYVKDRILKWLTDEEVQRTRSEFPKIQYLIVEMSPVTDIDTSGIHAFEDLLKSLHKREVQLLLANPGPIVTEKLNTSKLSSLIGEGNIFLSVADAVATFGVKGGEV. 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07240 649 Pfam Sulfate permease family 88 467 IPR011547 GO:0016020
Seca7g07240 649 NCBIfam sulfate permease 75 638 IPR001902 GO:0016020|GO:0055085
Seca7g07240 649 SUPERFAMILY SpoIIaa-like 521 642 IPR036513 -
Seca7g07240 649 Gene3D STAS domain 499 644 IPR036513 -
Seca7g07240 649 PANTHER SULFATE TRANSPORTER 38 640 IPR001902 GO:0016020|GO:0055085
Seca7g07240 649 FunFam Sulfate transporter 31 499 645 - -
Seca7g07240 649 ProSiteProfiles STAS domain profile. 519 642 IPR002645 -
Seca7g07240 649 MobiDBLite consensus disorder prediction 1 25 - -
Seca7g07240 649 Pfam STAS domain 520 638 IPR002645 -
Seca7g07240 649 CDD STAS_SulP_like_sulfate_transporter 520 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07240 Seca-Chr7 175161246 175169709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07240 13 645 Inorganic Solute Cotransporters AT1G22150 70.820 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07240 K17470 - gmx:100784124 1036.17