Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07232 ATGGCTTCCGAACGTGTAATAAGCCCCGAGACATTGGGGAAAGCTGTGGACTCTCTCCTCAAATGGCGCAAATCTCAATCAGAGACCCAAAAGCCAAAACTCTTCGACCAAGACGAAGAGTTCGTTTACCTCGTCCTCACTCTGAAGAAAATCCCCCAAAAGGGTCGCGTTAACCCTCACAAGATCCCTCTCCCTCACTCCCTCCTCTCCCCTTTCTCCGAACAGCTGCTCATCCTCGACGACAGGCCCAACAAAGCCCGCATCACAAAGCCCCAGGCCCAGAAGAAGATCCAGTCTGACTCCATCCCCATCTCGAAGGTCCTCAACCTCTCTAAGCTCGCCTCCGGTTACCGTCCCTTCGAAGCGAAGCGGAAGCTCTGCGATTCGTACGACCTCTTCTTCGCCGAAAAGAGCATCGTTCCCCTCCTGCCGCGGTTGCTGGGGAAGCAGTTTTTCAAGAAGCGGAAGATTCCGGTGCCGTTGGATTTGAAGAAGAATAACTGGAAGGAGCAGGTGGAGAGGGCGTGTTCGGCGGCGATGTTGTTCTTGAGGACGGGGACTTGTAGTGTTGTTAGGGTTGCTAAGCTGAGCATGGGAAGGGATGAGATTCTGGAAAATCTGGTTGCTGCTATTGATGGTGTTGTTGAGGTTGTTCCCAAGAAGTGGGGGAATGTGAGGTTGTTTCATGTGAAGTTGTTGGATTCAATTGCCTTGCCGATTTATCAGGTCCTTCCTGATTTGAAGTTGAAAATTGAGGGTGCAAAGGCCGATATGGAGGTGCAGGAGAAGAAGAAGAAGGAGAAGAAGGATGAGGCTGGAGAGATTAAGAAGAAGAAGAAGAAGAAGGGGAGGATCCATGAAGTTAGGTACATGGATGATGGTGGTGGTGATAACAATGATGAGGTTGGCAATGGGGGCTATGGTGTGGAAGATGATTCCGAGGATAATAAAAAGGGGAGTGGAGGGTTGGTGAATAAGAAGAGGAAGAACAGAATTAAAGCAGAGAAAGTGTCTCCAAGTGTGAAAAAATTGAAGGAATCTCCTAAGGAAGGTGTCAAGCGGAAGAAGAAAGATAGTGTGTCTGTGAAAGCTGCCAAGGAAGGGTAG 1107 0.495 MASERVISPETLGKAVDSLLKWRKSQSETQKPKLFDQDEEFVYLVLTLKKIPQKGRVNPHKIPLPHSLLSPFSEQLLILDDRPNKARITKPQAQKKIQSDSIPISKVLNLSKLASGYRPFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKQFFKKRKIPVPLDLKKNNWKEQVERACSAAMLFLRTGTCSVVRVAKLSMGRDEILENLVAAIDGVVEVVPKKWGNVRLFHVKLLDSIALPIYQVLPDLKLKIEGAKADMEVQEKKKKEKKDEAGEIKKKKKKKGRIHEVRYMDDGGGDNNDEVGNGGYGVEDDSEDNKKGSGGLVNKKRKNRIKAEKVSPSVKKLKESPKEGVKRKKKDSVSVKAAKEG. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07232 368 Gene3D - 86 178 IPR016095 -
Seca7g07232 368 Pfam Ribosomal protein L1p/L10e family 20 235 IPR028364 -
Seca7g07232 368 MobiDBLite consensus disorder prediction 334 368 - -
Seca7g07232 368 MobiDBLite consensus disorder prediction 261 368 - -
Seca7g07232 368 CDD Ribosomal_L1 14 240 IPR028364 -
Seca7g07232 368 MobiDBLite consensus disorder prediction 261 277 - -
Seca7g07232 368 SUPERFAMILY Ribosomal protein L1 21 241 IPR023674 -
Seca7g07232 368 Coils Coil 244 278 - -
Seca7g07232 368 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 14 235 - -
Seca7g07232 368 FunFam Ribosomal protein L1p/L10e family 86 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07232 Seca-Chr7 175073694 175074800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07232 129 231 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 2.17e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07232 K14775 - gmx:100782862 446.817