Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07220 ATGTCAGGAGAGGAAATTTGGTCATCAGCTGAGGAAGAATCTAGTGAATCTCTGCCTCCATTTGATAACAGGAATGGCTACAATTCAAGAACAGGCATTTATCACTCTCTTGTTAGGCTTGGAACCAAGCATGAAATCCCAACAAAGCTTGATCTTAACACTGCCAGTCTTGTGCTATCACAGTTCCCACATGCAGACATTGCTGAGGCAAGAATTGCATTCATTGATTCAAGTACTAATCAGAGAGTAAGCTATGGTGAGCTTCGCAGGTCTATTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGATTAGGAAAGGGGATGTGGTGTTTGTATTGTCCCCAAACTCAATCTTATACTCAACCATATGTCTAGCTGTGTTATCTGTTGGAGCAATTCTAACCACTGCCAATCCCCTCAATACTGAGTCAGAAATTGCCAAACAAGTGTGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGAGGAGCTACACAAATTAGTCCCAACTGGGGTGCCTAGAATTCTCACCTCTCGTCCATCTGATGGGAATTTGTTGTCAGTTGAAGAGTTAATAGAAGGCTGCTATAATTCACAAGAGTTGCCACATGTTCCTGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCAGGGACTACAGGGGTAAGCAAAGGTGTAGTTTTGACACATGCAAATCTCATTGCCATAATGAAACTACTCTTCTGGTCTGCTGATGTATCTGCATCCCAAGATGATGTTTTCTTGGCATTCATTCCAATGTTTCACATATATGGATTGGTATTCTTTGGATTGGGGCTGTTGTGTGTTGGTGTTACAACAGTTTTGATGCAGAAATTTGACTTCCAAGCTATGCTTGTTGCTATCCACAAGCACAAAGTTAACAACTTACCAGCAGTTCCACCAGTGATCCATGCATTGGTAAAATATGCAAGCAAAGCTGGGTTTGATTTGTCCAGTCTAAGAAAGGTGGGGTCAGGGGCTGCACCTTTGAGTAAGGAAGTGGCACAGGAGTTTAGAAAGAAGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGGCTAACAGAGAGTTGTGGTGCAGCAACATTTTTTGTGTCTGATAAAGATGCTAAAGCTCATCCAGACTCATGTGGGAAGCTGATTCCAACATTCTGTGCAAAAGTGGTAGACACTGAAACAGGAAAGCCCTTGCCTCCTCACAAGGAGGGAGAGTTATGGCTGAAAAGTCCTACTATTATGAAAGGATATCTAGGAAATTTGGAGGCAACAACTGCAACAATTGATCCAGAAGGTTGGTTGAGGACAGGTGATCTTGGTTATATTGATGACAATGGATTTGTTCATGTAGTTGAACGGATAAAGGAGCTAATCAAGCATAAAGGGTATCAGGTGGCTCCGGCAGAACTGGAATCTGTACTGCTAAGTCACCCCCATATTGTTGATGCAGCAGTTATACCGGTTGAAGATGAAGAAACTGGACAAATACCAATGGCATATGTGGTGAGAGCAGCTGGCTCTGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCTGGCCAGGTCACTCTTAGCTTATGGTCATTTTAA 1614 0.4281 MSGEEIWSSAEEESSESLPPFDNRNGYNSRTGIYHSLVRLGTKHEIPTKLDLNTASLVLSQFPHADIAEARIAFIDSSTNQRVSYGELRRSIYSLASALFHGLEIRKGDVVFVLSPNSILYSTICLAVLSVGAILTTANPLNTESEIAKQVCDSGAKLAISAPEELHKLVPTGVPRILTSRPSDGNLLSVEELIEGCYNSQELPHVPVAQSDTAAILYSSGTTGVSKGVVLTHANLIAIMKLLFWSADVSASQDDVFLAFIPMFHIYGLVFFGLGLLCVGVTTVLMQKFDFQAMLVAIHKHKVNNLPAVPPVIHALVKYASKAGFDLSSLRKVGSGAAPLSKEVAQEFRKKFPWVELRQGYGLTESCGAATFFVSDKDAKAHPDSCGKLIPTFCAKVVDTETGKPLPPHKEGELWLKSPTIMKGYLGNLEATTATIDPEGWLRTGDLGYIDDNGFVHVVERIKELIKHKGYQVAPAELESVLLSHPHIVDAAVIPVEDEETGQIPMAYVVRAAGSELSEDQVIQFVAGQVTLSLWSF. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07220 537 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Seca7g07220 537 Pfam AMP-binding enzyme 70 467 IPR000873 -
Seca7g07220 537 Pfam AMP-binding enzyme C-terminal domain 477 529 IPR025110 -
Seca7g07220 537 SUPERFAMILY Acetyl-CoA synthetase-like 64 529 - -
Seca7g07220 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 530 - -
Seca7g07220 537 Gene3D - 42 463 IPR042099 -
Seca7g07220 537 Gene3D - 464 534 IPR045851 -
Seca7g07220 537 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Seca7g07220 537 FunFam Long-chain-fatty-acid--CoA ligase FadD 44 463 - -
Seca7g07220 537 CDD 4CL 46 530 - -
Seca7g07220 537 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07220 Seca-Chr7 174995291 174997719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07220 22 530 Monolignol Biosynthesis Gene Families AT1G20500 43.822 1.05e-139 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07220 K10526 - gmx:100796728 865.529