Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07218 ATGAAGAAAACCCTCGTTTACCACATAGGTCGCGCTCCACACGGCGATCGCACTAATTGGGTCATGCATGAATACAGGATGGTCGATGAGCAATTGGCCCAAGCTGGAGTATTGCAGGATGCTTATGTGCTGTGTAGGATTTTCGAAAAGAGTGGTCAAGGACCCAAGAACGGGGAGAAGTATGGGGCCCCTTTCATAGAAGAGGAATGGGATGATGATGCAGTGGTAGATGCCGTGCCCGTGCCCGTTCAGTCCTTGCCGGCTGTTGATGATGAGGATTTGAAGGAGGTGTCTGCTATTGGTGCTTATATTGAAAATAAGGACCTTGACAAGAACCTTGATGATACAAATGTTACAATTGGAACTGCTGGTTTTTCATCAAACTTCCATCATGGAGAGTGTAGTAGCCATCCTCAGCATTTTGATCAGAAGCCATTGGTGGGAACTTTTGGAATTTATGGGCCTCAAAATGACCGGCCTTTTAATATGGCTGAGCAATATGATATGGACACCAATGCGGTGAAAGATGGAGACACTGTTGAGCTGAACCATGATGGAAATTCTCTGAATTTCAGTTATCCTTTTGATGATCTGGATGTGTACTTTGATGCCACTGGTTATCCTCTGAGTTTTGATGATGGATCATTCCTGGAAACCAATGATCTTGTGAATCTGGGTGAGGGTAATCCCACTGAGGCAGATCCTTCTGGTACTGATATGCTAGATGAGTATCTTGCATGCAGTGATGACGATATTCTCAAGTATATATCTTTTGATTCTCCTCAGAATACAGAGAGTCAAAGCCCTGTTATTGACCAAGGACCTGCTTCTGTTGAGAAGAGTGTGGAGGGAGATATTTCCCTGGCAAGCAAACATGTTTTTGATGAAGCACAATCCAGCAATGAAGCTTCTTCAAAACATAATCCACAGGCGTCCAAGATGGTATCAGGAGAGACAAATCCATTCGTAAAGCAGGCCAATAAATTGTTGGCCAGCATACCTGCTCCACCAGCATTTGCTTCAGAGTTTCCTACTAAGGAGTTTGCTCTTGGGCTTCATCCTGCTGCTCAGTCTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGCATAACAGACATTACTTTAAGAGGAGAGGCGATGGATTGGATGGTGGGCAAGAATGGAGGGTTTAATAATCCCCTTATGTCTACTGGGTTTTCTCAACCTGGTGTTAACTCTGCTGCTTTGATGCCTATTTGTGGCTTGGTTTCTAGCAAGACTGCATTTGTGTTGTCGCATGGCTGGATTTTCTTGATGAGTTTTTCGGTTCTGATTCTCTCATTGAGTTTCAAGATTGGATGCATCATGTATAGTGGTAAATGA 1365 0.4396 MKKTLVYHIGRAPHGDRTNWVMHEYRMVDEQLAQAGVLQDAYVLCRIFEKSGQGPKNGEKYGAPFIEEEWDDDAVVDAVPVPVQSLPAVDDEDLKEVSAIGAYIENKDLDKNLDDTNVTIGTAGFSSNFHHGECSSHPQHFDQKPLVGTFGIYGPQNDRPFNMAEQYDMDTNAVKDGDTVELNHDGNSLNFSYPFDDLDVYFDATGYPLSFDDGSFLETNDLVNLGEGNPTEADPSGTDMLDEYLACSDDDILKYISFDSPQNTESQSPVIDQGPASVEKSVEGDISLASKHVFDEAQSSNEASSKHNPQASKMVSGETNPFVKQANKLLASIPAPPAFASEFPTKEFALGLHPAAQSSNSAHVTAGMISITDITLRGEAMDWMVGKNGGFNNPLMSTGFSQPGVNSAALMPICGLVSSKTAFVLSHGWIFLMSFSVLILSLSFKIGCIMYSGK. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07218 454 MobiDBLite consensus disorder prediction 297 316 - -
Seca7g07218 454 Gene3D NAC domain 1 54 IPR036093 GO:0003677|GO:0006355
Seca7g07218 454 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 161 - -
Seca7g07218 454 MobiDBLite consensus disorder prediction 260 274 - -
Seca7g07218 454 SUPERFAMILY NAC domain 1 50 IPR036093 GO:0003677|GO:0006355
Seca7g07218 454 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
Seca7g07218 454 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07218 Seca-Chr7 174973426 174976576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07218 1 446 NAC Transcription Factor Family AT5G04410 33.809 2.91e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07218 - - aprc:113871167 516.538