Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07205 ATGCTAAACCCTAAACGACATCGAATTCCTGCGGTGCGGTGTCCGGTGGCTTCTGGTTCCCAGCCCTCAGTTGCAACTCTCTTCTCCGATCTTCGGTCTCTTTCTACAATCAGAGCTGGTATTGTTGAAGGCTGCTGGGTCGGTCTCTGTGAAGTCTTCTGTGTTGGGACTGACTCTGATTTTGCTCCAATGGAGATGAAGGTCAAGTCTGTGCCTCTCATGTTAAGATTGCAATTGGATTTTTCACTTTTTGGTTCTGTTTGGTGGCTTTATCAATTGGCTTTATTCTATGACCTTGTAACACAGCCAAGCATGGCATTCACAGCTAATTCATGCTGTGAATTGTTGTACTTTTCTGTCCCTCCATTGCAGCCAAATTCTAGTTCACTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAATGCTGGGGATTGTCGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGCATTTCAGAAATTTAA 546 0.4469 MLNPKRHRIPAVRCPVASGSQPSVATLFSDLRSLSTIRAGIVEGCWVGLCEVFCVGTDSDFAPMEMKVKSVPLMLRLQLDFSLFGSVWWLYQLALFYDLVTQPSMAFTANSCCELLYFSVPPLQPNSSSLDISSGTTALTALVFGRTMIIANAGDCRAVLGRRGRAIEMSKDQKPNCISEI. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07205 181 ProSiteProfiles PPM-type phosphatase domain profile. 6 181 IPR001932 -
Seca7g07205 181 PANTHER PROTEIN PHOSPHATASE 2C 83 180 IPR015655 GO:0004722|GO:0006470
Seca7g07205 181 Pfam Protein phosphatase 2C 128 181 IPR001932 -
Seca7g07205 181 Gene3D - 111 181 IPR036457 -
Seca7g07205 181 SUPERFAMILY PP2C-like 129 180 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07205 Seca-Chr7 174874542 174879867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07205 126 180 PP2C-type Phosphatase Gene Family AT2G33700 81.818 5.18e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07205 K14803 - gmx:100778015 105.531