Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07193 ATGGATCATGTTAATGTATCACATGAAGCTGTGGTTGTGGTGAATGAAGACGATGAATTTCGACAGAGTGAAAATGTAAACATTACTATGGGCAGTCGGGATGTTCGCATGGAGGAGGCAGAAGACAATATAGAAATTGAGGTTGGCATGAGGTTTGACAATGCGGAAGAAGTTAAGAGGCTTTACCAGGAGTTTGCAATAAGAAAAGGATTTGCTGTTATGACCAGGAATTCCCGAAAAGGACCTGATGGTAAGGTGACATACTTCATTTTTGCTTGTTCAAGCCAGGGGACTTATGTTTCATCCACACCCACTGATGTGAAGGCAACATCTAGTAGAATGCACTGTACAGCTCACATCACTGTGACTCTGCGTAAAGATGGGTTTTGGTACATCCAGAAATGTGTACATGAACATAGTCATGACCTGAGTCCTGGAAAGTCAAGATTATTTGCGAAGAACCGGAAGATGAGATTGCATGTGAAACGACTTGTTGAATTAGACGATGAAGCAGGTGTCAGGATAAACAAGAGCTTTCGATCTCTAGTTTATGAAGCAGAAGGATATGAAAATGTCCCATTTGTTGAAAGAGACATGCGGAATTACATGGGGCAGAAAGGACTGACCCTCGGCAAGGAGGGTGATGCCAAGGCCCTTCTAAGCTACTTTGCAAGAATGCAACAACAAAACTCAAATTTCTATTATGAAATAGACTTAGATGACGAAAGTCGCTTGAGACATGTATTTTGGGCAGATGCAAGGAGCAGGGCAACATATGAGTATTTTGGAGATGTTGTGACATTTGACACCACATACCTCACCAATAAATATGACATGCCTTTTACACCATTCGTCGGGGTGAATCATCATGGCCAATCTAGTTTACTTGGGTGTGGATTGGTATCGTCAGAAGAAACATCATCCTTTGTTTGGTTGTTTGAGACATGGCTTCGATGCATGGGTGGAAAGCCTCCGGTGGGTATTGTGACAGATCAGTGCAAGGCAATGCAAAAGGCCATTGAGATTGTATTTCCCATTACTCGACACAGGTGGTGTTTGTGGCACATCATGAAGAAAATTCTAGAAAAGTTGAAGAGTTATCTTCAATACAAGTTAATGAAGAATGAGTTGAAGTGTGTAGTGTACGACTCACTAAGTGAGGCTGAGTTTGAACTTGCATGGACGACTTTTATCAACAAATATGGATTAGAGGACAATGAATGGTTGTCGGGGCTGTACCATGATAGGTCCAAGTGGGTTCCTTGTTTGTTGAAGAAGCATTTCTGGGCAGGAATGTCAACCACACATGGAAGTGAAAGTGTCAATGCATTTTTTGATGGATATATCAATGCATCGACAAACCTACAACAGTTTGTTAAACAGTATGAGAATGCTTTGCATCAAAAGGCCGAAAAGGAATATGAGGCAGATTTCCAGTCTTTTAACACCATACTCCCTTGTGTGTCGAATTCGCCAATTGAGAGACAATTCCAGGATGAGTACACACATTCTAAGTTTAAAGAGGTTCAGATTGAATTTAGAGCAAAGATGAATTGCACTGCTGCTTGTGAAAGTGTGGATGGATCCCTATGTTTGTATAAGGTGATAGAAGACTTGTATGTTGGTGGAAATCCTAGAGAGGTGAAGTATGTTGTTAGGTTCAGTCGTGACCCGGTTAGCGTGGAATGCAACTGTCTCCTATTTGAGTTTAAAGGGATCCTTTGTAGGCATGCCCTGACTGTTCTATCTCAAGAAAGAGTAAAAGAAGTGTCGAATGTGTACCTATTACCCAGGTGGAGCAAAAATGTCCGTAGGAAGCACACTTACATTAAGTGCAGTTATGATGCCAAACAACATGACCCAAAAATGTGTCGTTTTGATGAGTTGTGTAAAGACTTCTATATGGTGGCTGAGATAGCAGCTGAAACTCCAGAGGGCACAAGTCTATTAGCACAAACTATTCTTGGTGTGAAAGATAAAGTGAAGGCAGTTGGTGCTTCCACACAAAATTTGTACTCAAATGAGGAAGTCAACCGTACTGAACAAGTTGAAGAAAGAATTTGTCAGGCTGCAGATCCTGTTGGTGAAGCATTAGTTTGA 2100 0.4138 MDHVNVSHEAVVVVNEDDEFRQSENVNITMGSRDVRMEEAEDNIEIEVGMRFDNAEEVKRLYQEFAIRKGFAVMTRNSRKGPDGKVTYFIFACSSQGTYVSSTPTDVKATSSRMHCTAHITVTLRKDGFWYIQKCVHEHSHDLSPGKSRLFAKNRKMRLHVKRLVELDDEAGVRINKSFRSLVYEAEGYENVPFVERDMRNYMGQKGLTLGKEGDAKALLSYFARMQQQNSNFYYEIDLDDESRLRHVFWADARSRATYEYFGDVVTFDTTYLTNKYDMPFTPFVGVNHHGQSSLLGCGLVSSEETSSFVWLFETWLRCMGGKPPVGIVTDQCKAMQKAIEIVFPITRHRWCLWHIMKKILEKLKSYLQYKLMKNELKCVVYDSLSEAEFELAWTTFINKYGLEDNEWLSGLYHDRSKWVPCLLKKHFWAGMSTTHGSESVNAFFDGYINASTNLQQFVKQYENALHQKAEKEYEADFQSFNTILPCVSNSPIERQFQDEYTHSKFKEVQIEFRAKMNCTAACESVDGSLCLYKVIEDLYVGGNPREVKYVVRFSRDPVSVECNCLLFEFKGILCRHALTVLSQERVKEVSNVYLLPRWSKNVRRKHTYIKCSYDAKQHDPKMCRFDELCKDFYMVAEIAAETPEGTSLLAQTILGVKDKVKAVGASTQNLYSNEEVNRTEQVEERICQAADPVGEALV. 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07193 699 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 654 IPR031052 GO:0006355
Seca7g07193 699 SMART 26again6 561 588 IPR006564 GO:0008270
Seca7g07193 699 Pfam FAR1 DNA-binding domain 61 144 IPR004330 -
Seca7g07193 699 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Seca7g07193 699 Pfam SWIM zinc finger 562 583 IPR007527 GO:0008270
Seca7g07193 699 Pfam MULE transposase domain 265 359 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07193 Seca-Chr7 174789342 174791441 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g07193 MULE 2.1e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07193 - - psat:127087122 754.977