Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07191 ATGGGAATGGCAGTGGGAGGTGATGATTTGCTCAGTGAAAAAGCAGCCATGATGAGAGAGTCTCTGCAGAAGAGCCAGACCATCACGGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTCTCTGCCCTTGAAACCGCCATGCGTCCAACTCAGATTAGAACTCATTCTATTAGGAAAGCTCATGAAAATATTGACAAGACTTTGAAGGCTGCAGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAATTTTTTAGTAGTAAGAAGGGTTTTAAGAGTACTGATGGCGTCGTTGGCCATGCTAATAATTTGCTAGCTAAAGCTATTTCTAAACTAGAGGATGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCTGTGGAGCCTGAGCGCCTCTTTGATTGCCTTCCAAACTCTATGCGACCTTCGTCAGGATCACCTGGCCATGAGGGTGATCACAGTGGCAAGAATCCTACTCATCACCATTCCGAGTCTCAGAACAATAATGCTGACGCTGTTGTGTACACACCTCCTGCTCTTATACCACCAAGAATTTTGCCCCTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGGAAACAGTTACTCAAAATATACAGAGATGCTCGTTCTACTGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGACCAGATATTTGAAGGCTTCGATTCACTCAGTGAACAGTGTTTTGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTTAGCTTTGGAGAAGCAATAGCGAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTCCATTCAGAGATTGAGACACTTTTTAAAGGCAAAGCTTGCACTGAAATAAGAGAAGCTGCAATGGGTTTGACAAAACGACTTGCACAAACAGCTCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACGAGCTACGTTATTAACTATGTGAAGTTTTTATTTGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAGTTTGAAGGTGGAGATGATTCTTCCCAGCTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACCAATCTAGATGGTAAATCAAAGCAGTATAGAGACCAGGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGATCTGAAGCCAAGGATTTGCTTGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTAGTACTGCTGGCGGTGATGGTGGAACTGGAAGTAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATGTTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACAGCGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCTTACAGATCATTTGTGAAACGATTTGGGTGTGTTCTCATTGTTGAAGGAACGGAGAGCGGTTACCAAGAAGCATGCGATTCCGGTGAAAAGAAGCGTTTTGCCGATAGCATAATTCCTCACATTCTGCGTCTGTATGGATCCTGTGCAACATCTCACGATTTTGAAATCTATGCCCCAAATGCTTCCTTTGAGGATCCACTTATGAGCGCACATGGGGTGAAGCAAATCAAATCAGCATTCTACTCTGTTCCCAAGGTATTTAGTGAGTCCAAGATTGTGGAATACAGTGTTAAAGAAAATATGGTCTCACCAGGAAAAGGAGAGATATTAATTGACAGCAAGCAACACTATAAATTCTTGGGGAAGAATATAGATATAGTATCGCTAATCAAGTTGTATGTTGAGGAGGGTAAAGTTGTTCGCCATGAGGACTGGTGGGACAAAAAACCAATTTCTAATAGAGAAACAGTAAAGCTGCCTTTGCTTGGCCGAGTTGCAGAAATGACTCGCAGGGGATCAATGCTGGCAACGCATCTGTTTATGAGGTTCGGAAAGGACCCAACTAACTAA 2388 0.4229 MGMAVGGDDLLSEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFSSKKGFKSTDGVVGHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHSGKNPTHHHSESQNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRKQLLKIYRDARSTVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTEIREAAMGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYRDQALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSSTAGGDGGTGSSSGASRAIVKDRFKSFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGCVLIVEGTESGYQEACDSGEKKRFADSIIPHILRLYGSCATSHDFEIYAPNASFEDPLMSAHGVKQIKSAFYSVPKVFSESKIVEYSVKENMVSPGKGEILIDSKQHYKFLGKNIDIVSLIKLYVEEGKVVRHEDWWDKKPISNRETVKLPLLGRVAEMTRRGSMLATHLFMRFGKDPTN. 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07191 795 Coils Coil 99 119 - -
Seca7g07191 795 MobiDBLite consensus disorder prediction 164 199 - -
Seca7g07191 795 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 627 IPR004140 GO:0000145|GO:0006887
Seca7g07191 795 Gene3D Exocyst complex component Exo70 75 625 - -
Seca7g07191 795 SUPERFAMILY NTF2-like 643 756 IPR032710 -
Seca7g07191 795 SUPERFAMILY Cullin repeat-like 77 615 IPR016159 -
Seca7g07191 795 Pfam Exo70 exocyst complex subunit 279 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07191 Seca-Chr7 174773754 174799059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07191 3 615 EXO70 exocyst subunit family AT5G03540 74.571 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07191 K07195 - gmx:100813987 1091.64