Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07161 ATGACAGCTTCACTGTCATGGGGGGATGAAGACACTCGGACTGTGTTTCCTTTGTATATCTGTCTGGCAATGCCAGATCCTAATAAGGAAGATGCAGGGTTTTCTGCTGCTTATCAAATCAAGCGGAAATACATCCTTCGAGATTCCTTTGGCATTGATGGCAGTACTAAACTCCAAGCAGACTTAATCCTCCCTGAACTTAAAAAGTTAGCTGTGAAGGCTAGATCTGGCTCATTTTCTGTCCTGATTTACACCCGTGTGGAAAATTCAGACTCATCATCTGGAGTCAATGCAAGCCTGGCGTCTTTGGATTTGACTTCTTATGAATCAATAGCAGGAGAGTATTGCTTATACGGGAAAGTATCTTTAGAATCACTTTATCTGGCTTGGAATGGTTCTCCAAATTTTAGATTGGGACAGCGAGCTGAGATGGTGTCTACTGTTGATATGCTCCCATGTATTTTGAAGCTTGAATCTGTAGATAAGAGCCAGAGAATCTCAATCAAAGATCTCTTTAATTCTGAGAGTGAGAGAAAGAGTACATCAAAGCAAGTTCAAATCACATTTTCTGCTGAAGAGTTTGGGGCCAAGGAAAGATCTCCCTACCTTACATATTCAAGCAGAAATCTGCCATGTTCACCATTCTCTCGTATCCTTCGGTTGAAAGAAGGAAATGTCATGTTTCATTACAGGTATTACAATAATAGGCTGCAGAGAACAGAAGCCACTGAAGATTTCATCTGTCCATTCTGTTTGGTTGCATGTGCAAGCTATAAGGGCCTAAGATGTCATTTGGTCTCATCTCATGATCTTTTCAACTTTGAATTTTCGGCATCGGAGGATTGCCCGGCTGTAACCGTGTCTGTGAAAACTGATATCCAGAGATATGAGATTGATGCAAATGGTATATCAGAAGATTTTATCTTTTGTGCCAAGCCCTTTAAACGCAGACGTCCAGAGAATGTATCTTTCGAAAATGAAAAGGATGCGGACCCATTGGTCTTAGAGTCTGAAATTCCTGCAGGAGATACTGAGCTTTTGGAGAAGGCTGATTCTGAAATTCCTGCAGGAGACACTGAGCTTTTGGAGAGGGCTGATTCTGAAATTCCTGCAGGAGATACTGAGCTTTTGGAGAAGGCTGATGGTGTTTCAAATGCAGTTGTTGCATCCAATCCTGATCCAGATAATGTCCCACCAATACCTGAGCATGATCATGGAACACCTGCAGTGCTAAAGGTTGCCAAGAAAGGGAAGTTACCAGTTGGGCGTTCTGGCCTGCGAAACAATTCCCTGTTGAAGAAGCGACAGTTTTATCACTCTCGCAGAGGCCAGCCAATGGCACTCGAAGAAGTTCTATCAGGCTGGGATAGTGAGGATGAAAGAGATGAAGAGATTGAAAACCTTGAAGAACAGCTGATGATAAATAGTTTTACTGATCTGACACCAGTTGAGAAACAATTCATGCATATGTGGAACAAATTTATTCGGAAGCAAGGAGTGCGGGCATTTAGTCACATTCATTGGGCATGTGAGGCTTTCGCAAAATTGCATGGCCTTGAGTTTGTTCAATCCCCCCAATTAGCTTGGCAATTCAGACTGTTGATGCTCAGACTAATTAATCTTAACCTTCTAGATGGAAAGACCATGAATGAATGTAATCTTATTCTTGAACATTACCAGAAGCAGCAGTCAGATCCCAGAGGCTAA 1707 0.4218 MTASLSWGDEDTRTVFPLYICLAMPDPNKEDAGFSAAYQIKRKYILRDSFGIDGSTKLQADLILPELKKLAVKARSGSFSVLIYTRVENSDSSSGVNASLASLDLTSYESIAGEYCLYGKVSLESLYLAWNGSPNFRLGQRAEMVSTVDMLPCILKLESVDKSQRISIKDLFNSESERKSTSKQVQITFSAEEFGAKERSPYLTYSSRNLPCSPFSRILRLKEGNVMFHYRYYNNRLQRTEATEDFICPFCLVACASYKGLRCHLVSSHDLFNFEFSASEDCPAVTVSVKTDIQRYEIDANGISEDFIFCAKPFKRRRPENVSFENEKDADPLVLESEIPAGDTELLEKADSEIPAGDTELLERADSEIPAGDTELLEKADGVSNAVVASNPDPDNVPPIPEHDHGTPAVLKVAKKGKLPVGRSGLRNNSLLKKRQFYHSRRGQPMALEEVLSGWDSEDERDEEIENLEEQLMINSFTDLTPVEKQFMHMWNKFIRKQGVRAFSHIHWACEAFAKLHGLEFVQSPQLAWQFRLLMLRLINLNLLDGKTMNECNLILEHYQKQQSDPRG. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07161 568 PANTHER POLYCOMB GROUP PROTEIN 9 565 - -
Seca7g07161 568 CDD VEFS-box_EMF2-like 432 559 - -
Seca7g07161 568 CDD ZnB-Zn_EMF2-like 220 293 - -
Seca7g07161 568 Pfam VEFS-Box of polycomb protein 420 554 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07161 Seca-Chr7 174444840 174467912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07161 12 560 C2H2 Transcription Factor Family AT5G51230 42.523 2.14e-137 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07161 - - gmx:100798991 514.998