Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07154 ATGGCTGTGCACATAAATCTCAAGCTCCATCACCTCTACCTTGTGATCCTAGTAGCACTAGCAAGAGCAGCCTCTCAACCAATGCCAAACTGCCCCCAAAACTGTGGCAATCTAAACATTACTTACCCATTTGGGACGCGTGAAGGTTGTTATTTGGATGACACTTTCCTCATCAGATGCAACCATAACTCCACCCCTTTCTTGGGCCAAGACAACAATATAACCGTTTTCAACATATCTCTAGATGGGGAACTTGTCGTTTCGAGTCCAGTAGTCCATGATTGCTATGACATCAAAGGCAACAACGATTTCAGTTATTCTGTTACGGAAAACGGTTTCAATTTGACTCATTTTTCTATCTCACCAAGCAAGAACAAATTTACGGCACTTGGCTGTGACACCGTTGGAATATTCGTTGGCTATGATCGGAACAAAAACAAAGCTACAAGAAAATTAGGATGTGTATCCATGTGTAGCACGGTGCTTGATGAAATCAAAATGGATACTTGTAATTCTGGTAATGGTTGTTGCCAAATTTCAATTCCGGATGGACTATATGGTTTTGCAATGCAAACTTGGAGTTGGAACAATCACTCCACCGTACTTGATTTCAATCCTTGTAACTATGCGTTTACGGTTGGAGAGGGATATTACAATTTCTCTTCAATGGATCTTAAGAAACTTGAAAAGGAGAGTGTGCCTTTGGTGCTTGATTGGGCAGTGGGAAATCAAAGGTGTAAAGAAGCTCAATATCTTAGTAGATATGCATGCAAGGCTAAGAATAGTGTTTGCCACGATTCCACCAATGGAATTGGGTATATTTGCAAATGCAAAGATGGTTTCATGGGAAACCCTTACCTCCATCATGGCTGCCAAGATGTCAATGAATGCAATAGGAAGCCTAGCCCCTGCAGCAGAATATGCAGAAACGTTGCTGGGACGTATAAGTGTTTGTGCCCAAAGGGATATGAGGGAGATGGGTTGAGAGATGGCGAAGGATGCCGGCCCAAAGACAAATCCATGGGGAGTGAAATTCTTGAAAAGAAAAGCTTGTTACTCTTATTTACAGGTTTGAGCTTAAGTCTTTTGGCAGTAATTGTGGGATGCATAAACATATATCCCCAAATACGTGAAAGAAAGCTCATCAAAATGAGAGAAAATTATTTTCAACAAAATGGTGGCATATTGTTACAACAACAAATTGATTCACATAATGGGTCAGCTGAAAGAGCCACAATCTTCACAGCTGAAGAGCTCAAGGAAGCTACCAACAATTATGATGAGGAAAGAATCATAGGTAAAGGTGGTCATGGAACAGTGTATAAAGGTGTATTATCAAATGGCAGAGTTGTAGCCATTAAGAAGTCCATGGTTTCTAACCAGACAGAGATTGAACAATTCATCAATGAAGTGGTTGTACTTTCCCAAATCAACCACAGGAATGTTGTAAAGTTGCTAGGTTGTTGTTTAGAGACAGAGGTTCCTCTGCTTGTTTATGAATTTATCACTAATGGAACCCTTTGTGATCATCTACATGTTGAAGCTGAACATCAAGCATGTAAACTTTCATGGACAACTCGTTTAAGAATTGCAGCAGAGACAGCAGAAGCTCTTGCATATTTGCATTCTGCTGCTTCTACACCAATCATACATAGAGATGTCAAAACTGCAAATATACTTCTAGATGAAAATCTCACAACAAAAGTTTCTGATTTTGGGGCTTCAAAGCTTGTTCCTCTTGATCAAACTCAATTGACCACTTTGGTGCAAGGAACATTGGGTTACCTTGATCCTGAATACTTTCAATCAAGTCAGCTAACAGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTTTTGGCAGAACTGCTAACAAGCAAGAAGGCACTTTCATTTCTTAGGCCTGAGATTCATAGAAATCTTTCTATGTATTTTGTTTCTTCAATGAATGAGGGTGGATTGCATCAAATCTTAGATAATGAAATAGTGAGTGATGCAAGTGTTGAGCATATAATAGAAGTTGCTAATCTAGCAAAAAGGTGTCTTAGGCTAAAGGGAGAAGAAAGACCAAGCATGAAAGAAGTGGCATTGGAGTTGGAGGGAATAAGGACTGTTGAAAAACATTCATTAGGAAAAGCTAATGTATATGAAGAAGAGACTGAGTACTTTCTCAAAGTAAGTTCACCCCTTTACATCATGGACAATGGAGAAGGTAGTGGTGGTAGCAGTACAATTACTAGGTTTTATAATTTGCAAAACCAGATTTTGGAACCACTAGGTGATGGACGATAA 2289 0.3949 MAVHINLKLHHLYLVILVALARAASQPMPNCPQNCGNLNITYPFGTREGCYLDDTFLIRCNHNSTPFLGQDNNITVFNISLDGELVVSSPVVHDCYDIKGNNDFSYSVTENGFNLTHFSISPSKNKFTALGCDTVGIFVGYDRNKNKATRKLGCVSMCSTVLDEIKMDTCNSGNGCCQISIPDGLYGFAMQTWSWNNHSTVLDFNPCNYAFTVGEGYYNFSSMDLKKLEKESVPLVLDWAVGNQRCKEAQYLSRYACKAKNSVCHDSTNGIGYICKCKDGFMGNPYLHHGCQDVNECNRKPSPCSRICRNVAGTYKCLCPKGYEGDGLRDGEGCRPKDKSMGSEILEKKSLLLLFTGLSLSLLAVIVGCINIYPQIRERKLIKMRENYFQQNGGILLQQQIDSHNGSAERATIFTAEELKEATNNYDEERIIGKGGHGTVYKGVLSNGRVVAIKKSMVSNQTEIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLCDHLHVEAEHQACKLSWTTRLRIAAETAEALAYLHSAASTPIIHRDVKTANILLDENLTTKVSDFGASKLVPLDQTQLTTLVQGTLGYLDPEYFQSSQLTEKSDVYSFGVVLAELLTSKKALSFLRPEIHRNLSMYFVSSMNEGGLHQILDNEIVSDASVEHIIEVANLAKRCLRLKGEERPSMKEVALELEGIRTVEKHSLGKANVYEEETEYFLKVSSPLYIMDNGEGSGGSSTITRFYNLQNQILEPLGDGR. 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07154 762 ProSiteProfiles EGF-like domain profile. 293 326 IPR000742 -
Seca7g07154 762 SMART serkin_6 426 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07154 762 ProSitePatterns Calcium-binding EGF-like domain signature. 293 317 IPR018097 GO:0005509
Seca7g07154 762 Pfam Wall-associated receptor kinase galacturonan-binding 31 84 IPR025287 GO:0030247
Seca7g07154 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Seca7g07154 762 FunFam Wall-associated receptor kinase 2 502 721 - -
Seca7g07154 762 Pfam Calcium-binding EGF domain 293 324 IPR001881 GO:0005509
Seca7g07154 762 SUPERFAMILY EGF/Laminin 289 325 - -
Seca7g07154 762 FunFam Fibrillin 2 288 330 - -
Seca7g07154 762 ProSiteProfiles Protein kinase domain profile. 426 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07154 762 SMART egf_5 245 292 IPR000742 -
Seca7g07154 762 SMART egf_5 296 335 IPR000742 -
Seca7g07154 762 SUPERFAMILY Protein kinase-like (PK-like) 410 698 IPR011009 -
Seca7g07154 762 FunFam Wall-associated receptor kinase 2 396 501 - -
Seca7g07154 762 CDD EGF_CA 293 326 - -
Seca7g07154 762 Pfam Protein kinase domain 426 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07154 762 CDD STKc_IRAK 432 701 - -
Seca7g07154 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 705 IPR045274 GO:0007166
Seca7g07154 762 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Seca7g07154 762 Gene3D Phosphorylase Kinase; domain 1 393 501 - -
Seca7g07154 762 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Seca7g07154 762 SMART egfca_6 293 335 IPR001881 GO:0005509
Seca7g07154 762 Gene3D Laminin 252 327 - -
Seca7g07154 762 Gene3D Transferase(Phosphotransferase) domain 1 502 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07154 Seca-Chr7 174405510 174409364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07154 7 725 Receptor kinase-like Gene Family AT1G21230 47.541 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca7g07154 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07154 - - vun:114190859 1023.46